| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2764 |
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| Symbol | |
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| ID | 4688253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2907905 |
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| End bp | 2909140 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639835772 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_982987 |
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| Protein GI | 121605658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.432246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.196965 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGCC TCCAGGCCTT CAAATACGAA CTCATGCCCA ACGGCGGGCA GCAGCGCCAG
ATGCGCCGCT TTGCCGGGGC CTGCCGCTTC GTGTTCAACA AAGCGCTGGC ATTGCAAAAA
ACCAATCACG CGGCGGGCGC AAAGTTCATG AACTACGTGG CATTGGCCAA TAAGCTCCCA
GACTGGAAGC AGGAGTTCGA GTGGCTCAGG CAAGCTCCAT CGCAAGCCTT GCAGCAAGTT
TTGAAAGACC TGGAGCGAGC CTGGAAAAAC TTCTTTGAAA GACGCGCCGC CTCCCCGAAG
TTCAAGAAAA AAGGTCAGCG CGAGGGTTTT CGTTTTCCGC AAGGCTTCAG GATCGACCAG
CCCAACAGCC GCATCTTCCT GCCCAAACTG GGATGGATGC GCTTTCGCAA CAGCCGGGAC
ATTGTGGGCA CGGCCAAAAA CATCACCATC AGCCAAGCGG GCGGCAAGTG GTTTGCCAGC
ATCCAGACCG AGCGAGAGGT AGAACAACCG ATTCCAGTCG CAACGACAGC CATCGGCATC
GACGTAGGCA TAGCGCGCTT TGCCACGATG AGCGACGGCA GTTTTGTGGA GCCGCTGCAC
AGCTTCAAGT GCCACGAACA GCGCCTGGCC AAATACCAGC GGCGCATGAG CCGCAAGGTG
AAATTCAGCA AAAACTGGCA CAAAGCGAAA AGAAAGGTTC AGAAAGTCCA CACCCGGATA
GCCAACGTCC GCAAAGACTT CCTGCACAAG ACGACAAGCG CCATCAGCCA AAACCACGCG
ATGGTCGCCA TTGAAGATTT GCAGGTACGC AACATGAGCA AATCGGCAGC GGGCAATGCA
GACAAGCCGG GCAAAAACGT CGCCGCCAAG TCCGGGCTGA ACAAAGCCAT CCTCGATCAA
GGCTGGTTCG AGTTCCGGCG GCAACTGGAG TACAAGCTCG CCTGGAACGG CGGGGTGCTG
ATAGCCGTGC CGGCGCAGTA CACCAGCCAG ACCTGTCCGT GCTGCGGGCA TGTCGCCAAG
GCAAACCGGA AAACGCAAGC GAAGTTTGAA TGCGTGGAAT GTGGCTACGA GAACCACGCC
GATGTCGTCG GCGCGATGAA CATATTGGCG CGGGGATACC GCGCAGCAGC CTGTGGAGAG
GACGGCTCTG GCCTTGTGCG CAAGCGCAGG GCGCAACCAG CCTCGGCGAA GCAGGAACCC
GCCGAAGCGA CTAGATGCGA GGCAACTCAT GTTTAG
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| Protein sequence | MQRLQAFKYE LMPNGGQQRQ MRRFAGACRF VFNKALALQK TNHAAGAKFM NYVALANKLP
DWKQEFEWLR QAPSQALQQV LKDLERAWKN FFERRAASPK FKKKGQREGF RFPQGFRIDQ
PNSRIFLPKL GWMRFRNSRD IVGTAKNITI SQAGGKWFAS IQTEREVEQP IPVATTAIGI
DVGIARFATM SDGSFVEPLH SFKCHEQRLA KYQRRMSRKV KFSKNWHKAK RKVQKVHTRI
ANVRKDFLHK TTSAISQNHA MVAIEDLQVR NMSKSAAGNA DKPGKNVAAK SGLNKAILDQ
GWFEFRRQLE YKLAWNGGVL IAVPAQYTSQ TCPCCGHVAK ANRKTQAKFE CVECGYENHA
DVVGAMNILA RGYRAAACGE DGSGLVRKRR AQPASAKQEP AEATRCEATH V
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