| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2739 |
|---|
| Symbol | |
|---|
| ID | 4688452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 2883968 |
|---|
| End bp | 2885317 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639835747 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_982962 |
|---|
| Protein GI | 121605633 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.479222 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0168851 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AGCGCTTGCG GCAACGTCCG CGCTGGCACC GCCGCGCCCG GCATGCACTC
GCGCATTCGC TGCGCGTGCG GCTGATGACG CTGTTCCTGC TGCTGGCGCT GGTGATGGCC
GGAACGTTTC TGCTGGGCAT GCAGTACGCG CTGTCCATCG GCTGGCGCGA CGCCGCGCGT
CCGCTGGTCG TCGATTACGT GGACCGGCTG GCCGCTGACA TCGGCAGCCC GCCCAGCCAG
GAGCGCGCCA CGGCGCTGAT TCAACGCCTG CCCTTGAGCG TTCGCATCAG CGGCCCGGCG
GTCAACTGGC GCAGCCACCC GGATGCGCCC GACTTTCAGC ACGGCAAGAA TTTCGGCAGG
CGCTGGAATG AAGATGAGCT TCGCTTCTTC GAGCGCAGCA CGGCGGACGG CCACAAGATC
GTGTTCGGCG TGGACGTGAA GGCCTGGCAC GACCGCCCGC GCTTCGTCGG CTGGGCTACG
CTGGCTGCGC TCTTGCTGCT GACCGCGCTG GCCTATGCCC GCGTGCGCCG CCTGCTGCGC
CCGCTGGACG ACATCCGCGC CGGCGCGCTG CGCTTCGGCG CGGGCGACTT CGACCAGCCG
ATTGCCTTGC GCTGCCCGCA AAAACCCGAT GAGCTGGGCG AGCTGGCCGC CACCATCAAC
ACCATGGGCG CCGACATCCG GCAGATGCTC GACGCCAAGC GCGGCCTGCT GCTGGCCATC
AGCCACGAGC TGCGCAGCCC GCTGACCCGC GCGCGGCTCA ACACCGAGTT GCTGCCCGAA
ACCGCCGAGG TGCAGCCCGC CCGCGACGCC TTGCTGCGCG ACCTGGCGCT GATGCGCGAC
CTGGTCACCG GCCTGCTGGA GAGCGAACGC CTGGCCAGCC GCCACGCCGC GCTGCAGCTG
GAGCCGACTG ACCTTGGCAG CCTGGTGAAA GAAGTGATTC ACGGGATGAG CGCCAGCAAC
CCCGCCGCGC AGCGCGTCAC GGTCAGCGCT TCGGCTGATG TGCCGCTCCA GATGCTGGAC
AGCACCCGCA TGCGCCTGCT GGTGCGCAAC CTGCTCGACA ACGCACTGCG CCACAGTGTC
GAGTCAAGCC GGCCGCCTGA AGTCAGTGTC AGCGCGCAAG GGCAGGGGCT GCGGCTCGCC
GTTCGCGACC ACGGCCCCGG CGTTGAAGAG GCCGCGCTGG CGCATCTGGC CGAACCCTTT
TACCGGCCCG ACAGCGCCCG CACCCGCGCC ACGGGCGGCG TGGGCCTGGG GCTGTATCTG
TGCCGGCTGG TGGCGCAGGC GCATGGCGGC AGCCTTGTTG TGCGCAACAC GCATCCGGGG
CTGGAAGTGC GGGTGCTTCT GCCGGGCTGA
|
|---|
| Protein sequence | MSTERLRQRP RWHRRARHAL AHSLRVRLMT LFLLLALVMA GTFLLGMQYA LSIGWRDAAR
PLVVDYVDRL AADIGSPPSQ ERATALIQRL PLSVRISGPA VNWRSHPDAP DFQHGKNFGR
RWNEDELRFF ERSTADGHKI VFGVDVKAWH DRPRFVGWAT LAALLLLTAL AYARVRRLLR
PLDDIRAGAL RFGAGDFDQP IALRCPQKPD ELGELAATIN TMGADIRQML DAKRGLLLAI
SHELRSPLTR ARLNTELLPE TAEVQPARDA LLRDLALMRD LVTGLLESER LASRHAALQL
EPTDLGSLVK EVIHGMSASN PAAQRVTVSA SADVPLQMLD STRMRLLVRN LLDNALRHSV
ESSRPPEVSV SAQGQGLRLA VRDHGPGVEE AALAHLAEPF YRPDSARTRA TGGVGLGLYL
CRLVAQAHGG SLVVRNTHPG LEVRVLLPG
|
|---|
| |