Gene Pnap_2731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2731 
Symbol 
ID4688388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2876938 
End bp2877723 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID639835739 
ProductGntR family transcriptional regulator 
Protein accessionYP_982954 
Protein GI121605625 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000186795 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0139063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTC CATCAGACCC GCCGGCGGCC GAGATGCCGG AAGAGGGCGG CTCGCAGGTC 
GTCAAGGCGC AACTCAGGCT GCGCGAGATG ATTCTGGCCG GCGAGTTGCC GGGCGGCGCC
CGCATTGCCG AGCTTTCCAT TGTCGAAAAG CTTGGCGTTT CGCGCACCCC CATCCGGGCC
GCGCTGATGC GTCTGGAGCA GGAGGGCCTG CTGGAGACCT TGCCCAACGG CGGCTACGCG
GTGCGCACTT TCTCGGAACG CGACGTGGCC GATGCCATCG AGCTGCGCGG CACCATCGAA
GGCATGGCTG CGCGGCTGGC CGCCGAGCGC GGCGTGGCGC CGGTGGTGCT GGCGGAAGCC
CGCGAATGCC TGCGCCAGGT CGATGACCTG CTGCGGGAAG CGGCGCTCAA CGACGATGCC
TTTTCTCGCT ATGTGGTGCT CAATGAAAAA TTCCACACCC TGCTGGGCGA GTTGTCGGGC
AGTCCGTTCA TGCGCCGTGA GCTTGAGCGT GTCTCCAGTC TGCCGTTTGC CTCGGCTTCA
GCTTTTGTGG TCGTGCAGGC CAACTCGCCG CAGGCCAGGG ACATGCTCGT CGTGGCGCAG
GACCAGCACC GCGAGGTGCT CGACGCCATT GAAAACCGCG AGGGCGCGCG CGCCGAATCC
ATCATGCGCG AACACTCCCG CCTGGCCAAG CGCAACCTGC GCGAAGCCGT GCGCAATCCC
CAGAACGAGC ACATGCCCGG CGTGCGCCTG ATCCGCAAGC GAAGCCTGAA GGAATGGTCT
GCGTGA
 
Protein sequence
MSIPSDPPAA EMPEEGGSQV VKAQLRLREM ILAGELPGGA RIAELSIVEK LGVSRTPIRA 
ALMRLEQEGL LETLPNGGYA VRTFSERDVA DAIELRGTIE GMAARLAAER GVAPVVLAEA
RECLRQVDDL LREAALNDDA FSRYVVLNEK FHTLLGELSG SPFMRRELER VSSLPFASAS
AFVVVQANSP QARDMLVVAQ DQHREVLDAI ENREGARAES IMREHSRLAK RNLREAVRNP
QNEHMPGVRL IRKRSLKEWS A