Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2731 |
Symbol | |
ID | 4688388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2876938 |
End bp | 2877723 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639835739 |
Product | GntR family transcriptional regulator |
Protein accession | YP_982954 |
Protein GI | 121605625 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000186795 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0139063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTC CATCAGACCC GCCGGCGGCC GAGATGCCGG AAGAGGGCGG CTCGCAGGTC GTCAAGGCGC AACTCAGGCT GCGCGAGATG ATTCTGGCCG GCGAGTTGCC GGGCGGCGCC CGCATTGCCG AGCTTTCCAT TGTCGAAAAG CTTGGCGTTT CGCGCACCCC CATCCGGGCC GCGCTGATGC GTCTGGAGCA GGAGGGCCTG CTGGAGACCT TGCCCAACGG CGGCTACGCG GTGCGCACTT TCTCGGAACG CGACGTGGCC GATGCCATCG AGCTGCGCGG CACCATCGAA GGCATGGCTG CGCGGCTGGC CGCCGAGCGC GGCGTGGCGC CGGTGGTGCT GGCGGAAGCC CGCGAATGCC TGCGCCAGGT CGATGACCTG CTGCGGGAAG CGGCGCTCAA CGACGATGCC TTTTCTCGCT ATGTGGTGCT CAATGAAAAA TTCCACACCC TGCTGGGCGA GTTGTCGGGC AGTCCGTTCA TGCGCCGTGA GCTTGAGCGT GTCTCCAGTC TGCCGTTTGC CTCGGCTTCA GCTTTTGTGG TCGTGCAGGC CAACTCGCCG CAGGCCAGGG ACATGCTCGT CGTGGCGCAG GACCAGCACC GCGAGGTGCT CGACGCCATT GAAAACCGCG AGGGCGCGCG CGCCGAATCC ATCATGCGCG AACACTCCCG CCTGGCCAAG CGCAACCTGC GCGAAGCCGT GCGCAATCCC CAGAACGAGC ACATGCCCGG CGTGCGCCTG ATCCGCAAGC GAAGCCTGAA GGAATGGTCT GCGTGA
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Protein sequence | MSIPSDPPAA EMPEEGGSQV VKAQLRLREM ILAGELPGGA RIAELSIVEK LGVSRTPIRA ALMRLEQEGL LETLPNGGYA VRTFSERDVA DAIELRGTIE GMAARLAAER GVAPVVLAEA RECLRQVDDL LREAALNDDA FSRYVVLNEK FHTLLGELSG SPFMRRELER VSSLPFASAS AFVVVQANSP QARDMLVVAQ DQHREVLDAI ENREGARAES IMREHSRLAK RNLREAVRNP QNEHMPGVRL IRKRSLKEWS A
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