| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2656 |
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| Symbol | |
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| ID | 4689044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2795491 |
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| End bp | 2798238 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835664 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_982879 |
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| Protein GI | 121605550 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT TCATTTCCTT TTTTGGCTTT TTTTGTCTCC GAAGGAAATG GCGGGCCAGC
GGCATCGCTA TTTTGTCGGC TTTCGCGCTG ATGGCCGCCG GCATGGTGCC CGCGCCCGCT
TTCGCGGCAT CACAGGCCAT GCCGGCAGAG CGCGTGAGCC TGCAACTCAA ATGGCTCCAC
CAGTTCCAGT TCGCGGGCTA CTATGCCGCC CAGGCCAAGG GCTTTTACCG TGATGAAGGA
CTGGATGTCG AGATACTGGA GGGCGGGGCG GACAAACCGG TGATTGCCCA GGTCCTGGGC
GGGCAAGCCG ACTTTGGCAT TGGCGACTCC GACCTGCTGA TCAGCCGGAT CAATGGGCAG
CCGGTGGTGG CGGTGGCGGC AATTTTCCAG CACTCGCCCT ACATCATCAT GAGCCGCCAG
GACCGCAACA TCCGCACGCC GGCAGACCTG ATCGGCAAAA CCGTCATGCT GTCAGAAGAC
CAGGGTGCGG TCCAGTTCCG TGCCATGCTC AAGCGCGAGG GAATCGATCC GGCACTCGTC
AATATCATTC CCCAGTCCTG GAAACTCGGC GACCTGATCA GCGGCAAGGT GGACGCGGTG
TCTGCCTATG CCACGGCAGA GCCTTCGGTG ATGCGTGCCC GGGGCGTCGT GCCGGCGATG
ATGCGCGGGG TCGATTACGG CGTTGACTTC TATGGCGACA TTCTTTTCAC GACCCAAGCG
CATATCGCAC AAAGTCCCGG GCGTACCGAT GCATTCCTGC GCGCTACCCG CAAGGGCTGG
GACTATGCCT TCAGCCACGA AGACGAGCTG ATTGACCTGA TCCTGCAGAT GGACGGTGCC
GTGCAGCGAG GCTTGACGCG TCAAACCCTG AGCGAGGAAG CCCGGGTGAT GCGTTCCTTC
ATCTTGCCCG ATGTGGTTGA GATTGGGCAC ATGAACCCGG CCCGCTTCGA TGCCACGGCC
CGGACGCTGG CAACCCTGGG GCTGGTGCCT GCGGGCATAC CACTGGCCGG TTTTGTGTAT
GAACCGCCTG ATGCAGTCAA CCCAAGGCTG TTGCGCTGGA TGACCGCCGC AGGTTTTGCT
GTTTTTGTAC TTGCCCTGCT GGGGCTGCTC TGGAACATGC AGATTCGCCG CCGCGTGCGC
GAAAGAACCG AGCAGCTGCA GGCCGAAGTC AACCACCGGA CCGAAGTGCA GCAGCAGCTC
AAGGCCAGCC AGGACATGAC GCAGCTGATG TTCGGCACTG CGGCGGCGGG CATCGCGATG
ACCACGCCAG GCGGAAAATT CCTGATGGCC AACCCTGCCT ACCATGCGAC TGTCGGCTAT
ACGCAAGCCG AGTTGCAGGT GATGGACATG CGCGAGTTGA CGCATCCCGA GGATTGTGTT
CGTTATGAGG AGATGACCAG GCAGTTGCTT GCCGGCGAAG TGGACACTTT TTCCCATGAA
ATGCGCTACC TGAAGAAGGG CGGCGACGCC GTGTGGGTGC GTGCAACGGT GTCGATGGTG
CGCTCCGCGG ACGGCGCGCC GACGCACATC ATTGCCGTGA CCGAGGACAT CACGCAGCGC
CGCGCCACCG AGGAAAAATT GCGCCAGAGC GAGGTCTTGC TGGAGATTGC CGGCCGAACG
GCGCAGCTCG GCGGCTGGAT GCTCGATCTG TCGGGCGGCC CCATGACCTG GTCCGACGAG
GTCTGCAAGA TCCATGAAAT GCCGATGGGC AGCAAGCCGC TGCTGCATGA AGTCCTGCAG
TACTGTTCAC CCGAGTGGCG CGAGAAAATG AAGGCGACCT TTGGCCGCTG CAGCCGCGAT
GGCGTGGCGT TTGACGAAGA GATGGAGATC ATCACCGCCA GCGGCCGGCG GGTATGGGTC
CGCGCCATTG CCGAGGCATT GCGCGACGAC CGTGGAGCCA TCACCCGGGT GCAGGGTGCT
TACCAGGACA TCACCGAGCG CAAGCAGGCA GAGCACCGCA TCGTGCGCCT CAATGCCGAA
CTGGAAAACC GTGTGAGCAG ACGGACCGCC AGCCTCGAAG CGGCGAACAG GGAACTGGCC
TCGGTGAACC GGGAACTGGA GACTTTTTCC TATTCCGTGT CGCACGACCT TCGCTCGCCG
CTCAATACGA TTGACGGTTT CAGCACATTG CTGGAGCGCA CGAGCGGGAG TCTGGTGGGG
GAAAAAGGGC TGCATTACCT GAGCCGGATT CGTGCCGGAA CCCGGCAGAT GGGCGACCTG
ATCGAGGGGC TGCTGTCGCT CGCCAAGCTT TCGCGTGATC CGCTGCAGTT CGGGGCGGTC
AATCTTTCCG GCATCGCCAG GCAAGTGCTG CAGGAGTGCA TGGACCGGGA ACCCGTGCGC
GAGGCGAATG TGTGCATTCA GGAAAGCCTG ACTGTTCAGG GCGACCCGCG CCTGTTGTCG
GTCGTCGTTC ACAACCTGGT GGGCAACGCC TGGAAGTTCA CTTCGAAGCG GGTGGTGGCG
CACATCGAGA TGGGTTGCGA GACGGCCGTC AATGGTGAAA CCGTTTATTT CGTCAAGGAC
AACGGTGCCG GGTTTGACAT GGCGTATGAA GACAAGCTGT TCACCACCTT CCAGCGGCTT
CATTCCCCCA GTGATTTTTC CGGTTCCGGG ATTGGTTTGG CAACCGTGCA GCGAATCATT
GCCCGGCATG GCGGCCGGGT CTGGGCGCAT GGCATTGAAG GGCAGGGGGC GGATTTTTAT
TTCACCCTGG GTGATGGCAA GGCAGCCAGC CTGTCGGATA CGCTGTGA
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| Protein sequence | MSRFISFFGF FCLRRKWRAS GIAILSAFAL MAAGMVPAPA FAASQAMPAE RVSLQLKWLH
QFQFAGYYAA QAKGFYRDEG LDVEILEGGA DKPVIAQVLG GQADFGIGDS DLLISRINGQ
PVVAVAAIFQ HSPYIIMSRQ DRNIRTPADL IGKTVMLSED QGAVQFRAML KREGIDPALV
NIIPQSWKLG DLISGKVDAV SAYATAEPSV MRARGVVPAM MRGVDYGVDF YGDILFTTQA
HIAQSPGRTD AFLRATRKGW DYAFSHEDEL IDLILQMDGA VQRGLTRQTL SEEARVMRSF
ILPDVVEIGH MNPARFDATA RTLATLGLVP AGIPLAGFVY EPPDAVNPRL LRWMTAAGFA
VFVLALLGLL WNMQIRRRVR ERTEQLQAEV NHRTEVQQQL KASQDMTQLM FGTAAAGIAM
TTPGGKFLMA NPAYHATVGY TQAELQVMDM RELTHPEDCV RYEEMTRQLL AGEVDTFSHE
MRYLKKGGDA VWVRATVSMV RSADGAPTHI IAVTEDITQR RATEEKLRQS EVLLEIAGRT
AQLGGWMLDL SGGPMTWSDE VCKIHEMPMG SKPLLHEVLQ YCSPEWREKM KATFGRCSRD
GVAFDEEMEI ITASGRRVWV RAIAEALRDD RGAITRVQGA YQDITERKQA EHRIVRLNAE
LENRVSRRTA SLEAANRELA SVNRELETFS YSVSHDLRSP LNTIDGFSTL LERTSGSLVG
EKGLHYLSRI RAGTRQMGDL IEGLLSLAKL SRDPLQFGAV NLSGIARQVL QECMDREPVR
EANVCIQESL TVQGDPRLLS VVVHNLVGNA WKFTSKRVVA HIEMGCETAV NGETVYFVKD
NGAGFDMAYE DKLFTTFQRL HSPSDFSGSG IGLATVQRII ARHGGRVWAH GIEGQGADFY
FTLGDGKAAS LSDTL
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