Gene Pnap_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2652 
Symbol 
ID4689413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2790566 
End bp2793007 
Gene Length2442 bp 
Protein Length813 aa 
Translation table11 
GC content67% 
IMG OID639835660 
Producthypothetical protein 
Protein accessionYP_982875 
Protein GI121605546 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.442336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA CCCTGGAGCA ATTCCGCCAA GCCATCACGG CAGCGGGCAT TGAAGCGCCT 
GACGACATTC ACGACGATGG CGCAATCCAC CGCTTCAGCC CCAGCGGCCG GGGCAGCGAC
AAGGCGGCCT GGTACATGCT GCACACGGAT GGCATCCCGG CTGGTGCGTT CGGTGACTGG
CGTAGCGGCC TGCAATCGAC CTGGTGCGCC AAGTCCGACA GCGCCATGAC GGCGACAGAG
CTGGCTGACC ACCGGCAGCG CGTCAAGGCC ATGAAGGCAC AGCGCGACGC TGATCTACTG
GCCACCCAGC AACAGGCCAG CGCGACGGCG GCGGCATTGC TGGCGCAGGC GGACGCGGCA
ACAGCGCATC CTTACTTGAG CGCCAAAGGC GTGAAGGGCC ACGGATTGAA GGTGTTCAGC
GACAAGCTCC TGATCCCCAT GCGCGACACG GCCGGCAAGC TGCACAGCCT GCAGGCCATC
ACGCCGGACG GCGAGAAGCG CTTTCACCCG GGCGGGCGCA TCAAGGGCTG CTATCACTCG
ATTGGTAAAC CGGCGGGCCG TCTGGTCATC GCGGAAGGCT ACGCCACGGC GGCGAGCATC
CATGAAGCCA CGGGCGACGC GGTGGCCGTG GCCTTCAACG CGGGCAACCT TGAAGCCGTG
GCGCTGGCCC TGCGCGCCAA GTACCCGGCG CTGGTGCTGA TCGTGGCGGC CGATGACGAC
CACCTGACCG ACGGCAATCC CGGACTGAGC AAAGGCACGG CGGCGGCGCT GGCCGTGGGC
GGGCTGGTGG CCGTGCCATC GTTCCCGGCG GGCAGGCCCG ACAAGGCGAC GGACTTTAAC
GACCTGGCCG TAATAGCGGG GCTGGACGCG GTGAAGGCCT GCATGGATGC TGCTATCGAA
TCAGTAGCTA CCCATGCAGG CAGCGCAAGC GCAACAGGCC AGATTGACCT ATGGCCTGAG
CCTACGCCCT TGCCCAATGC CTTGCCCCCG GTGCAGGCCT TTGACGCCGA CTTGCTGCCC
GTGGCCCTGC GGGGCTGGGT GATGGACATT GCGCACCGGA TGCAATGCCC GCCAGACTTC
CCGGCAGTCG CCGCGCTGGT GGCGCTATCG AGCCTGATCG GGGCGCGCGC CGTGGTGCAG
CCCAAGGCGC GGGATGACTG GCAGGTTGTG CCGAACCTGT GGGGCATGAC CATAGGCAGG
CCGGGCGTGA AGAAAAGCCC GGCGCTCAGC GAAGCCTTGA AGCCGCTCAA CCGACTGCAG
GCCGATGAGT TCGAGCTGCA CCAAGCCGCG CATGACGCCT GGGAACTGGA CTGCAAGGTA
TCCGCCATGC AGGACAATGC CAACGAGAAA AGGGCAAAGG GGCTGGCCGG TAAAGACCCG
GCGGCGGCGC GCGCCCTGTT GGAGCCGGTG GTCCTGCCTG CCGAACCCAC GGCGCGGCGC
TACACCGTCA ACGATGCGAC GGTGGAAAAG CTGGGCGAGC TGCTGATGCA CAACCCGTGG
GGCACCTTGT CCTACCGGGA TGAGCTGTAC GGCCTGCTGA CCGGCCTGGA CAAGCAGGGG
CAAGAGGGTT CACGGGCTTT CTACCTGCAG AGCTATGACG GGAATCAGGG CTACACCTTT
GACCGCATCG GGCGCGGAAC GACGCACATC CCGCGTGTGT GCCTGGCGAT GATCGGGGGC
ATCCAGCCGG GCCGGATTCA GGAATACGTG CGCGGCGCGG TGGCCGGTGG CAGCGCAGAC
GATGGTCTGC TGCAACGCTT TGGGCTGGCC GTCTGGCCGG ACACGGGCGG CGAGTATGTC
CACGTTGACC AGTGGCCCGA CACGCCGGCC AAGCAAGCTG CATGGGCGGT GTTCGAGCGC
CTGGCCGCAT TGCAGCCGGC GAGTGACCTG GACGCGACCG TCTGGCGCTT TGACGATGAC
GCGCAAGCCC TGTTCGTGGA GTGGCTGATC CCGTTTGAAA ACGAGATACG CGGCGACGAA
CTGCACCCGG CGATGGTGTC GCACCTGTCC AAGTACCGCA AGCTGATCCC GGCGCTGGCG
CTGGTGTTCG CCATGATCGA CACACCGGAG GGCGGCGTGA TCCATGAGCC TGAGCTGCTG
CGGGCGCTGG CCTGGGGCGA CTACCTGCGC ACCCATGCCA GCCGGCTGTA CGCGGCGGCG
GTGACACCGG AAACCACGGG CGCGGCGGCG CTGCTGGTCA AGATCAGGGC GGGCAAGCTG
GCCGACAAGG ATGGCGTGAT TCTGGACAGC TTCACCCCCC GGCAGGTGGC TATCAAGCAT
TGGGCCGGAC TGGACACGCC CGACGCCGTG CGCAAGGCAG CGGACGTGCT GGCGGACTTC
GATTGGTTGC GCCGGGAGGT GGTGCAGTCT GGCGATGCAT TGGGCCGGGG CAGACCGAGC
GACCGCTACA CCATCAATCC GAGGGCAAGG GGCGCGGCAT GA
 
Protein sequence
MNDTLEQFRQ AITAAGIEAP DDIHDDGAIH RFSPSGRGSD KAAWYMLHTD GIPAGAFGDW 
RSGLQSTWCA KSDSAMTATE LADHRQRVKA MKAQRDADLL ATQQQASATA AALLAQADAA
TAHPYLSAKG VKGHGLKVFS DKLLIPMRDT AGKLHSLQAI TPDGEKRFHP GGRIKGCYHS
IGKPAGRLVI AEGYATAASI HEATGDAVAV AFNAGNLEAV ALALRAKYPA LVLIVAADDD
HLTDGNPGLS KGTAAALAVG GLVAVPSFPA GRPDKATDFN DLAVIAGLDA VKACMDAAIE
SVATHAGSAS ATGQIDLWPE PTPLPNALPP VQAFDADLLP VALRGWVMDI AHRMQCPPDF
PAVAALVALS SLIGARAVVQ PKARDDWQVV PNLWGMTIGR PGVKKSPALS EALKPLNRLQ
ADEFELHQAA HDAWELDCKV SAMQDNANEK RAKGLAGKDP AAARALLEPV VLPAEPTARR
YTVNDATVEK LGELLMHNPW GTLSYRDELY GLLTGLDKQG QEGSRAFYLQ SYDGNQGYTF
DRIGRGTTHI PRVCLAMIGG IQPGRIQEYV RGAVAGGSAD DGLLQRFGLA VWPDTGGEYV
HVDQWPDTPA KQAAWAVFER LAALQPASDL DATVWRFDDD AQALFVEWLI PFENEIRGDE
LHPAMVSHLS KYRKLIPALA LVFAMIDTPE GGVIHEPELL RALAWGDYLR THASRLYAAA
VTPETTGAAA LLVKIRAGKL ADKDGVILDS FTPRQVAIKH WAGLDTPDAV RKAADVLADF
DWLRREVVQS GDALGRGRPS DRYTINPRAR GAA