| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2602 |
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| Symbol | |
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| ID | 4689450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2738295 |
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| End bp | 2739293 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835609 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_982825 |
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| Protein GI | 121605496 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000225562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CCACCGCCAC CCTGGCCCTG ACCGCTCTGG CTTTTGCCGC TTCCAGCGCG
TTCGCGGCCG AACCCGTGAT CGGGCTGATC ACCAAGACCG ACAGCAACCC TTTCTTCGTC
AAGATGAAGG AAGGCGCCGA GGCCGAGGGC AAAAAACTGG GCGCCAAGGT CATCAGCGGC
TCCGGCAAGA CCGACGGCGA CAACGCCGGA CAGATCACGG CCATGGAAAA CATGATTGCG
GCTGGCGCCA AAACGATCCT GATCACGCCC AGCGATGCCA AGGCCATCAT CCCGGCCATC
AAGAAAGCCC AGCAAAACGG CGTGATGGTG ATTGCCCTGG ACAGCCCGAC CGACCCGGTC
AGCGCCGTCG ATGGCCTGTT TGCCACCGAC AACTACAAGG CCGGCGTGCT CATCGGCCAG
TACGCCAAGG CCGCCCTGGG CGGCAAGAAG CCCGTCATCG CCACGCTCGA CCTGCTGCCC
GGCCACCCGG TGGGCGCCCA GCGCCACAAC GGCTTCCTGC AGGGCTTTGG CCTGCAGTCG
CTTGACGCCA AGAGCAACGA CCTGGCCAAG CCGGCCGAAG TGGTCTGCAT GGCCGACAGC
TTTGGCGATG CGGCCAAGGG CCAGACCGGC ATGGAAAACT GCCTGCAAAA GAACCCGGCC
ATCAACCTGG TCTACACCAT CAATGAGCCC GCAGCGGCGG GCGCCTACAA GGCACTGAAG
ACCGCCGGCA AGGAAAAAGA CGTGGTGATC GTCTCGGTGG ACGGCGGCTG CGCCGGCGTC
AAGGACGTGG GCGCCGGTGT CATTAGCGCC ACTTCGCAGC AATACCCGCT GAAGATGGCC
GCCATGGGCG TTGCCGCCGG CGTGGAATAT GCCAAGACCG GCAAGAAGGT CAGCGGCTAC
ACCGATACCG GCGTGACCCT GATCGCCGCC AAGGCCCAGC CCGGCGTGGA CAGCAAGGAT
GTCAAAACCG GCATGGACCT GTGCTGGGGC AAGAAGTAA
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| Protein sequence | MKKSTATLAL TALAFAASSA FAAEPVIGLI TKTDSNPFFV KMKEGAEAEG KKLGAKVISG
SGKTDGDNAG QITAMENMIA AGAKTILITP SDAKAIIPAI KKAQQNGVMV IALDSPTDPV
SAVDGLFATD NYKAGVLIGQ YAKAALGGKK PVIATLDLLP GHPVGAQRHN GFLQGFGLQS
LDAKSNDLAK PAEVVCMADS FGDAAKGQTG MENCLQKNPA INLVYTINEP AAAGAYKALK
TAGKEKDVVI VSVDGGCAGV KDVGAGVISA TSQQYPLKMA AMGVAAGVEY AKTGKKVSGY
TDTGVTLIAA KAQPGVDSKD VKTGMDLCWG KK
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