Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2568 |
Symbol | |
ID | 4687809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2705873 |
End bp | 2706643 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639835576 |
Product | TonB family protein |
Protein accession | YP_982792 |
Protein GI | 121605463 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.127416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00103277 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTCAGG TCATGGCACG CCGTGCCATC AGCCCGCATG ATGATTCCAC TTCAATGAAC GCCACCGCCC TTTCAGCCTT CTCCATGCAG CCAGCCGACC TGCCTCGCCC GCGCCTGAGC CGCAACGCCG CGATTGCGCT GGGCGTGGTG GCGCTGCATG CCGGCCTGAT CTGGGCGCTG CAAAGCGGCC TGCTGCTGCG CACGGCGCAA CTGATCGTTC CGGTCGAGGT GCTGGCGCAA TTGATCGAAC TCCCCGAACC CAAGGCAGAA CCCGCCCCGC CGGCTCCACC CGCGCCGCCG GTGCGGCCCG TCACGCCCAG TGTGCAGAAA AAAGTCGTTC CGAAGCCAGC CGCCCGGCCG CAAGCGCAGC CGCTGGCCAT TGCCGACCCG ACGCCCTCGC CCAACGCCCC CACGGGCAGC CTCGCGCCGG CAGTTGCAAG CACGCCTACT GCGGCTCCCG AAGCGCCAGC AGCGCCAGCG CCTGCGGCCG TGCAGCTGCC GTCCAGCAAT GCCGACTACC TGCAAAACCC CAAGCCGGCC TATCCCCCGC TCAGCAAGCG CCTCGGCGAG CAGGGCAAGG TGGTTGTCCG CGTGCTGATC GGCGCCGATG GCGTGCCGCA AAAAGCCGAG CTTCGGCAGT CCAGCGGCTT TGACCGCCTT GACCAGGCCG CGCTGGCCAC CGTCCTCAAA TGGCGCTACG TGCCCGGCAA GCGCGGCGGC GTGGCCGAGG ACATGTGGTT CAACGTGCCG ATCAATTTTG TTCTTGAATA G
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Protein sequence | MTQVMARRAI SPHDDSTSMN ATALSAFSMQ PADLPRPRLS RNAAIALGVV ALHAGLIWAL QSGLLLRTAQ LIVPVEVLAQ LIELPEPKAE PAPPAPPAPP VRPVTPSVQK KVVPKPAARP QAQPLAIADP TPSPNAPTGS LAPAVASTPT AAPEAPAAPA PAAVQLPSSN ADYLQNPKPA YPPLSKRLGE QGKVVVRVLI GADGVPQKAE LRQSSGFDRL DQAALATVLK WRYVPGKRGG VAEDMWFNVP INFVLE
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