Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2559 |
Symbol | |
ID | 4687466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2697480 |
End bp | 2698163 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835567 |
Product | putative hydroxylase |
Protein accession | YP_982783 |
Protein GI | 121605454 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00546533 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCTGA CCCTTCCCAA TCTCCTTTCC CCTGCGGACC TGCTGGCCGC GCGCGCGCTG CTGTCGGCGG CGCCCTGGGC CGATGGCCGC GCCACGGCCG GCATCCAGGC CGCGCAGGTC AAGAACAATG AACAGCTTCC CTCCGATTGC GAGGCGACGC GCGCCATTCA GGCAATGGTG ATGAAAGGGC TTGATGGCAG CCCGGTCTTT TTTTCCGCCG CGCTGCCGAA AAAGATGTTT CCGCCGCGCA TCAACCGATA CGGCGGCGAC AGCAATTTTT ACGGCAACCA TGTTGACAAT GCCATCCGCG CCGTTCCCAA CAGCCCGCAG CGCGTGCGCA CCGACATCTC CTGCACGGTA TTTTTGAACG ACCCCGGCGA CTATGACGGC GGCGAACTCA CCATTGCCGA CACGTATGGA GAGCAGCGCG TCAAGCTGCC GGCCGGGCAT GCCGTGCTGT ATCCGGGCAC CAGCCTGCAC CAGGTCCGGC CGGTGACGCG CGGGCACCGG CTGGCCTGCT TTTTCTGGAT CGAAAGCCTG GTGCGCGGCG ATGACCAGCG GCGCCTGCTT TATGAACTCG ACATGAACCT GCTGCGCCTG CGCGAGCGGC ATGGCGAAAC CGCCGAGACG ACGGCATTGA CCGGCACCTA CCACAACCTG CTGCGCATGT GGGCCGACAC ATGA
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Protein sequence | MLLTLPNLLS PADLLAARAL LSAAPWADGR ATAGIQAAQV KNNEQLPSDC EATRAIQAMV MKGLDGSPVF FSAALPKKMF PPRINRYGGD SNFYGNHVDN AIRAVPNSPQ RVRTDISCTV FLNDPGDYDG GELTIADTYG EQRVKLPAGH AVLYPGTSLH QVRPVTRGHR LACFFWIESL VRGDDQRRLL YELDMNLLRL RERHGETAET TALTGTYHNL LRMWADT
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