Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2549 |
Symbol | |
ID | 4686630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2686391 |
End bp | 2687119 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639835557 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_982773 |
Protein GI | 121605444 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.152899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACT CAGCCGATAC CCGTTCCCGC AGCCGTTTTT TTGCCCTGAT TCCGTGCGCC GGGCAGGGCA GCCGGGCCGG CGTGGTGGCC GGGCAGGCCA AGCAGTACCA AAAAATTGCC GGCCAAGCGA TGGTGCTGCA CACGCTGGCG GCTTTTCTGG CGGTCGGGCG TCTGGCCCGA ACGCTGGTGG TGGTCGCGCC GGGCGACGGT TTCTTTGATT CAATCACCGA AAAACAGTTC GACGTGGCCG CGTGTGGCGG CGCCAGCCGG GCGACAAGCG TGCGCCGGGG GCTTGATGCG CTGCTTCAGT CCGGGGCGCA AGCCGGGGAC TGGGTGCTGG TCCATGATGC CGCCCGCTGC CTGGTGACGC CCGGCCAAAT CAAGCAGCTG ATCGACGCCT GCCGGCATGA CGAGGTGGGT GGCCTGCTGG CGCATCAATT GCCCGACACG CTCAAGCAGG CGGCCAGCGG GCGCGTTTCC GGCACGCTGG ACCGCAGCGA CAAATGGCTG GCGCAAACGC CGCAGATGTT TCGCATCGGC CTCTTGACGC AGGCGCTGGA TGCCGCCGAA AGCGCGGGAA GGGCCGTCAC CGACGAGTCC AGCGCCATTG AAGCGCTGGG CCTGGCGCCC AGGCTGGTGC CCGGCAGCGC GCAGAACTTC AAGGTCACCT ACCCGGACGA CTTTGCGCTG GCCGAGGCGA TTCTCTTGAG CCGGGTCCGC CCGGACTGA
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Protein sequence | MTNSADTRSR SRFFALIPCA GQGSRAGVVA GQAKQYQKIA GQAMVLHTLA AFLAVGRLAR TLVVVAPGDG FFDSITEKQF DVAACGGASR ATSVRRGLDA LLQSGAQAGD WVLVHDAARC LVTPGQIKQL IDACRHDEVG GLLAHQLPDT LKQAASGRVS GTLDRSDKWL AQTPQMFRIG LLTQALDAAE SAGRAVTDES SAIEALGLAP RLVPGSAQNF KVTYPDDFAL AEAILLSRVR PD
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