Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2536 |
Symbol | |
ID | 4690206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2673124 |
End bp | 2673738 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639835543 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_982760 |
Protein GI | 121605431 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.137211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.503574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAAGTA ATAAATCCAT TCAATCGCCC TCAGGCGAGC CTTCCGTGGC CGGTAGTCTT TCTCCAGAAG AAATTTCTGT CCATAACGCC AGCAAGGCTG CTGACAAGAC TGAGGCGACG CGGATCATCA AGAAATACCC AAATCGGCGT CTCTACGATA CTGAAACTTC GGCTTACATC ACCTTGGCCG AAGTTAGGCG CCTGGTGATG AGCAGTACGC AGTTTGTCGT GCGTGACGCC AAAACCAATG AAGACCTCAC GCGCAGCATC CTGCTTCAGA TCATTCTTGA AGAGGAGGCC GGTGGCGCGC CCATGTTTAC CGAGGCCGTG CTGGCCAACA TCATCCGTTT CTACGGCGAT GCAATGCAGA GCTTCATGGG TGCATACCTT GAGAAAAATG TCCAGAGTTT CATGGACTTG CAGCTCAAGA TGGCCGAGCA GTCCAAAGGG ATGAGTCCCG AGATGTGGGC GCAGTTCATG AATGCAAAGT CGCCCATGAT GCAAGGCATG ATGGGGGCTT ATGTCGAGCA ATCCAAGAAT GTCTTTACGC AGATGCAGGA GCAGATGCAA AAGCAGAGCG AGCAAATGCT GTCAGCACTG GGGCTGAAGC GTTAA
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Protein sequence | MQSNKSIQSP SGEPSVAGSL SPEEISVHNA SKAADKTEAT RIIKKYPNRR LYDTETSAYI TLAEVRRLVM SSTQFVVRDA KTNEDLTRSI LLQIILEEEA GGAPMFTEAV LANIIRFYGD AMQSFMGAYL EKNVQSFMDL QLKMAEQSKG MSPEMWAQFM NAKSPMMQGM MGAYVEQSKN VFTQMQEQMQ KQSEQMLSAL GLKR
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