| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2497 |
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| Symbol | |
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| ID | 4688883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2632633 |
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| End bp | 2633598 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639835505 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_982722 |
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| Protein GI | 121605393 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC ACCAGAACAC GTCCAGCCAT GAGTTCCACC GCAGGTCGGA CGATGCACTG
CGGCGCGCCC TCGGCGCTGA CATCCTGGCC GCCCTGGCTG ATGACCGGGT GGTAGAGATC
ATGCTAAACC CGTCGGGCGA CCTCTGGACT GACTCCCATG TAGGCGGGAT GCAATGCATT
GGCAAGATTG ACCGTGTACG AGCCATGGCG ATTGTTGCCA CGGTGGCGGC CATGCTGGGT
ACCACGGTCA CACCTGACAA CCCGATTTTG GAATGCGAGT TGCCCTTGGA TGGTTCGCGG
TTTGAAGCCT TGATTCCACC GGTTGTGCCA GCGCCAACTT TTGCCCTTAG AAAAAAGGCA
ACATTGATTT TTAGCCTGGC TGACTATGTT CGGACCGGGG TGATGACTGA GCTGCAAGCC
ACATTGATCA AAACGGCGGT TGCAGACAGA AAAAATATCC TGATTGCCGG GGGCACTGGC
TCTGGCAAAA CGACTTTAGC CAATGCCGTC TTGAATGAGA TTTCTTTCAT ATCACCTGAT
CACAGAATCG TCATTATTGA AGACGTGTTG GAGCTGCAAT GCAGCGTGAA AAACACGGTA
TTTTTAAGAA CATCAGCCAA TATTGACCAA GTTGGTTTAT TGCGAGCAAC GCTTCGATTA
AGACCTGACC GAATTGTTGT GGGTGAGGTC CGGGACAAGT CGGCTCTGGC GTTGCTGAAG
GCATGGAATA CGGGGCATCC CGGCGGCATT GGCACCGTCC ATGCAAATTC TACTGGTACA
GCCTTGGTCC GAATCGGACA GTTAATTCAA GAAGCGGGTG TGCCTGCGGC ACCTGAGTTA
ATCAGCGAAG CGGTCAATAT GGTGATATCC ATCCGCAGGA ATTCCACCGG CCGAATTATT
GATGAAGTAG CTGAAGTAAC CAATTGGTCG AGTGCGATTG GTTTTGAGCT GAGACGACTT
GGCTAA
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| Protein sequence | MSTHQNTSSH EFHRRSDDAL RRALGADILA ALADDRVVEI MLNPSGDLWT DSHVGGMQCI
GKIDRVRAMA IVATVAAMLG TTVTPDNPIL ECELPLDGSR FEALIPPVVP APTFALRKKA
TLIFSLADYV RTGVMTELQA TLIKTAVADR KNILIAGGTG SGKTTLANAV LNEISFISPD
HRIVIIEDVL ELQCSVKNTV FLRTSANIDQ VGLLRATLRL RPDRIVVGEV RDKSALALLK
AWNTGHPGGI GTVHANSTGT ALVRIGQLIQ EAGVPAAPEL ISEAVNMVIS IRRNSTGRII
DEVAEVTNWS SAIGFELRRL G
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