Gene Pnap_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2389 
Symbol 
ID4688378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2520806 
End bp2522605 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content61% 
IMG OID639835399 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_982617 
Protein GI121605288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.979451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCT TTTCTTCCAC GACAGGCGCT GATACCTCAT CGGGCCGCAG ACCATCAGCG 
CTGTTGGGAA TCGTCATCCC GTTAACCTTG CTGGCCGCCT GCACCTCTGT GCAGCTGCCA
CCCTGGACTC CTCAACTGCC ACGCCTCACT GCAACGACAG GCGCAGCCCC CATGCCCATT
CCGGTTGAGC CTGCGGTTGT TGTGCAAACC TCTCCGGTTG TTCCGCCATC AGTGATTGCA
AATGCGTCTG TTGAAGCGCC AGCGCCTTAT AGCGCTGCGG TTGCAGCCCG CTTTCCGGCG
CCGTCGATGG CTTACAACAC CCCGGGCCTG CAAGCCAGCC GCACGGCCTT CACCACCCAG
GATGAAGTCC ACATCTGGCT GCGCGATCAG GCGACAGCCC TGTCCCGCTC GGTTGGCGTC
AAGGCCGCCG TGCTGCCTAT CGGCACCTCA CAGCAAGGCC AGCCACTGGA AATGCTGGTG
CTGACTCGCG GCACCGGCAC CGACCCTGCC GCACTTCAGG CAACAGGCCG GCCTACCGTA
CTGCTGATCG GCCAGCAGCA TGGTGATGAA CCTGCAGGCA GCGAAGCCCT GCTGGTCATT
GCCAGGGAAC TGGCACAGGG ACTGCTGCAG CCACTGCTTG AGCGCATCAA TGTGGTGATT
GTTCCACGTG CCAATCCCGA TGGCGCAGAG CGGGGGGAAG CGTTCACCGC CAGCGGCCAG
GACATGAGTC GCGATCATTT ACTACTTGAT ACGTCCGAAG CCCAGGCGCT GGCCCGCGTC
ACACGCGACT ACCGGCCCAC AGTGGTGCTG GACGCGCATG AATACAGGGT GGAAGGCCCT
TCGTACCTGG AAAAATTCAA TTCCGTGCAG AAGTTCGATG CACTTTTGCA ATACTCCACA
ACGCCCAATC TGCCCGAGTT TTTGACCAAG GCCGATGAGG AGTGGTATCG CCGGCCCCTG
CTGGCCGCAC TCAAGGGCCA GGGCCTGAGC AGCGAGTGGT ATCACACCAC GTCAACAGAT
ATGGCCGACC GGAAAATCGC CATGGGCAGC CCCGAACCTG TCACCAGCCG CAATGTGGAA
GGCCTGAAGA ATTCCGTCAG TCTGGCTGTC GAAACGCGCG GCGCAGGCAT TGGACGGCTG
CATATCCAGC GGCGTGTACA TACCCATGTC ACGGCGATCA CGAGTGTGCT GGGCAGCACC
GCCCAGCGCG CCAGCGAGCT GAGCCAGTTG CGGCCCTATA TTGAAAAGGA AGTCAGCAGC
CAGGCCTGCA AGGGGCAATC GATTGTCGAA GCCGCCAACA CGCCTGCGCA ATATGACCTG
CAAATGCTCG ATCCGGTGAC CGGTGCCGAC AAAACAGTGA CCGTCGATTG GGATTCGGCC
CTTGCGCTGC GCCCCCTGAA GTCACGGGTT CGCCCTTGCG GTTACTGGCT TTCAGCCTCT
TCAACAACTG CGGTCGAACG GCTGCGACTG CACGGCGTCC AGGTTCTCCG GGTACTCGAA
CAAAGCGCCC TGCTGGGCGA TATTTATCGG GAAACATCCC GCACGGGTAA CGCGCAGCAA
GCCAGCATGG CCGATGGCCA GCCCATCATC AAAACCGCTG TTGCGCTGAT GCGCGGCGTG
ATTGACGCGC CGGCAGGCAG TTATTACGTA CCCTTGAACC AACCCCTGGC CAATCTGGCG
ATAGCAGCCC TGGAACCCGA TACACGCAGC AGCTATTTTG CAAACCGGCT GCTCGATGGG
CTTGCAAGCA CTGCACGGAT CATGTCCGAA CCTTCGTTAA AGGCCGAAGA GCTGCCTTGA
 
Protein sequence
MPFFSSTTGA DTSSGRRPSA LLGIVIPLTL LAACTSVQLP PWTPQLPRLT ATTGAAPMPI 
PVEPAVVVQT SPVVPPSVIA NASVEAPAPY SAAVAARFPA PSMAYNTPGL QASRTAFTTQ
DEVHIWLRDQ ATALSRSVGV KAAVLPIGTS QQGQPLEMLV LTRGTGTDPA ALQATGRPTV
LLIGQQHGDE PAGSEALLVI ARELAQGLLQ PLLERINVVI VPRANPDGAE RGEAFTASGQ
DMSRDHLLLD TSEAQALARV TRDYRPTVVL DAHEYRVEGP SYLEKFNSVQ KFDALLQYST
TPNLPEFLTK ADEEWYRRPL LAALKGQGLS SEWYHTTSTD MADRKIAMGS PEPVTSRNVE
GLKNSVSLAV ETRGAGIGRL HIQRRVHTHV TAITSVLGST AQRASELSQL RPYIEKEVSS
QACKGQSIVE AANTPAQYDL QMLDPVTGAD KTVTVDWDSA LALRPLKSRV RPCGYWLSAS
STTAVERLRL HGVQVLRVLE QSALLGDIYR ETSRTGNAQQ ASMADGQPII KTAVALMRGV
IDAPAGSYYV PLNQPLANLA IAALEPDTRS SYFANRLLDG LASTARIMSE PSLKAEELP