Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2318 |
Symbol | |
ID | 4689426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2455242 |
End bp | 2455721 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639835329 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_982547 |
Protein GI | 121605218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00165339 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCTGC TGACCGGGGT TGAGTCCACC GAGCTGTTCG GCGGCACGGT TTCCCCGGCC GTGCAGCACC TGATCGACGT GGCGCGCAAT GCGCCGCCCG CGCAGGTGGA GGCGGCGCTG TGGACGGCGG CGGCCACCGC ACCGGACCAA TTGCCGGTGT ATTACCTGCT CTACAAGATG CACGCCGGGC GCGGCCAGCT CGACCTGGCG CTGTCTGCGG CCAGCAAGGG CCTGGCGGCT GCGGCCAAGG CGGCGCAACT GGCCGCTGAC TGGCGGCTGG TGGCGCCTGG CGATACCGAT TTTTCGGTGC CGGGACCGGC GCGCTTCTGG CTCTTCACGC TCAAGGCGCT GGCCTTCATC AGCCTGCGCC GGGGCGAGCG CAACACCGCT GCGGCGCTGG TGGCGCAACT GCGCCTGCTG GACCCGGAAG ACCACCTGGG CGCCAGTACC GTCGAGACGC TGCTGCGCGA GTCGGTTTGA
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Protein sequence | MNLLTGVEST ELFGGTVSPA VQHLIDVARN APPAQVEAAL WTAAATAPDQ LPVYYLLYKM HAGRGQLDLA LSAASKGLAA AAKAAQLAAD WRLVAPGDTD FSVPGPARFW LFTLKALAFI SLRRGERNTA AALVAQLRLL DPEDHLGAST VETLLRESV
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