Gene Pnap_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2318 
Symbol 
ID4689426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2455242 
End bp2455721 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content71% 
IMG OID639835329 
Producttetratricopeptide TPR_2 
Protein accessionYP_982547 
Protein GI121605218 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00165339 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGC TGACCGGGGT TGAGTCCACC GAGCTGTTCG GCGGCACGGT TTCCCCGGCC 
GTGCAGCACC TGATCGACGT GGCGCGCAAT GCGCCGCCCG CGCAGGTGGA GGCGGCGCTG
TGGACGGCGG CGGCCACCGC ACCGGACCAA TTGCCGGTGT ATTACCTGCT CTACAAGATG
CACGCCGGGC GCGGCCAGCT CGACCTGGCG CTGTCTGCGG CCAGCAAGGG CCTGGCGGCT
GCGGCCAAGG CGGCGCAACT GGCCGCTGAC TGGCGGCTGG TGGCGCCTGG CGATACCGAT
TTTTCGGTGC CGGGACCGGC GCGCTTCTGG CTCTTCACGC TCAAGGCGCT GGCCTTCATC
AGCCTGCGCC GGGGCGAGCG CAACACCGCT GCGGCGCTGG TGGCGCAACT GCGCCTGCTG
GACCCGGAAG ACCACCTGGG CGCCAGTACC GTCGAGACGC TGCTGCGCGA GTCGGTTTGA
 
Protein sequence
MNLLTGVEST ELFGGTVSPA VQHLIDVARN APPAQVEAAL WTAAATAPDQ LPVYYLLYKM 
HAGRGQLDLA LSAASKGLAA AAKAAQLAAD WRLVAPGDTD FSVPGPARFW LFTLKALAFI
SLRRGERNTA AALVAQLRLL DPEDHLGAST VETLLRESV