| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2314 |
|---|
| Symbol | |
|---|
| ID | 4688958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2452153 |
|---|
| End bp | 2453268 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639835325 |
|---|
| Product | electron transfer flavoprotein beta-subunit |
|---|
| Protein accession | YP_982543 |
|---|
| Protein GI | 121605214 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.261239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG CCCCTACCCC TGCTGCCGCA CCGGCCAAGC GCCCCGCCGG CCGTGGTGGC
CGCAACCTGG AACTGTCCGA CGAACTCAAG GCCTACAAGG GCGTGTGGGT GTTCATCGAG
CATGACCGCG GTCACGTCCA CAGCGTTTCC TGGGAACTGA TCGGCGAAGC GCGCAAGCTG
GCCGACACCC TGGGCTGCCC GGTCAGCGCC ATCTTGCTCG GCGGCCCGGA CGAGCCGCTG
GAGAAGTTCG CCGCCGAGGC TTTCACGTTT GGCGCCGACA AGGCCTACAT CATGAAAGAC
CCGGTGCTCA AGGGCTACCG CAACGAGCCC TTCACCAAGG GAATGACCGA CCTGGTGAAC
AAATACCAGC CGGAGATTTT CCTGCTTGGC GCGACCTCGA TGGGCCGCGA CCTGGCCGGC
TCTGTCGCCA CCACGCTGCT CACCGGCCTG ACCGCCGACT GCACCGAACT GAAGATCGAC
CCCACGTCCA AGGCGCTGGC CGCGACGCGT CCGACCTTCG GCGGCTCGCT GTACTGCACC
ATCATGACGC TGGCCTACCG CCCGCAGATG GCCACGGTGC GCCCGCGCGT CATGCTGATG
CCGCGTGCCG ACGCCAGCCG CACCGGCGAG ATCACCTACG ACACGCTGGG CATGATCGAA
ACCGACATCG TCACCAAGAT GCTCGATTTC ATCGCCGACG CCAACAGCAA CAAGATCAAC
CTGCCGTATG CCGACGTCAT CGTCAGCGGC GGCAAGGGCC TGAAGAACCC CGAGAACTTC
AAGCTGGTGT TCGAGCTGGC GCGGGTGCTG GGCGGCGAAG TCGGCTCCAC CCGCCCCTGC
GTGCAGGCCG GCTGGGTCGA GGCTGACCGG CAGGTCGGCC AGACCGGCAA GACGGTTCGG
CCCAAGCTCT ACATTGCCGC CGGCATTTCC GGCGCCATCC AGCACCGCGT GGGCTGCGAG
GCGGCCGACG TGATCGTGGC CATCAACACC GATGTCAACG CGCCGATTTT TGAATTCGCG
CATTACGGCA TCGTCGGCAA CGCGATGCAG GTGCTGCCCG CGTTGACCCA GGCTTTCGCC
GCCCATCTGG CGCTGCGCAG CCGCCAGGTG GCTTGA
|
|---|
| Protein sequence | MSQAPTPAAA PAKRPAGRGG RNLELSDELK AYKGVWVFIE HDRGHVHSVS WELIGEARKL
ADTLGCPVSA ILLGGPDEPL EKFAAEAFTF GADKAYIMKD PVLKGYRNEP FTKGMTDLVN
KYQPEIFLLG ATSMGRDLAG SVATTLLTGL TADCTELKID PTSKALAATR PTFGGSLYCT
IMTLAYRPQM ATVRPRVMLM PRADASRTGE ITYDTLGMIE TDIVTKMLDF IADANSNKIN
LPYADVIVSG GKGLKNPENF KLVFELARVL GGEVGSTRPC VQAGWVEADR QVGQTGKTVR
PKLYIAAGIS GAIQHRVGCE AADVIVAINT DVNAPIFEFA HYGIVGNAMQ VLPALTQAFA
AHLALRSRQV A
|
|---|
| |