Gene Pnap_2306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2306 
Symbol 
ID4686362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2446087 
End bp2446554 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID639835317 
ProductUspA domain-containing protein 
Protein accessionYP_982535 
Protein GI121605206 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAGC GAATACTTGT TCCGGTTGAC GGCAGCGAAA CCGCCAACAA GGCCTTGGTC 
GCCGCCCTGC AACTGGCCCG GGAATCGGGT GGCCGCGTGC GGCTCATCCA TGTGCTTGAA
GAGCTGGCCT ACCTGACCGG CTACGAGCAG TACGGCGCTT ATTCGGGCGA GTTGATCACG
GCCATGCGCG ACACCGGAGC CAAAATACTC GATGACGCCC TGGCGGTCGC CCAGTCGGCG
GGCGTGCCGG CCGACAGCCT GCTGTGCGAT AAGCTGGGCG ACCGGCTGGC CGAAGCGGTC
GCCGATGCCG CGAAGCAATG GAAGGCCGAC CTTGTCGTCG TCGGCACCCA CGGCCGGCGC
GGCATCGGCC GTGTGCTGCT GGGCAGTGGC GCCGAGCAAA TCCTGCGACT GGCGCAGGTG
CCGGTGCTGG TGATTCGCTC GGGCGAGAGC GCCAGCCCGG CGGCTTGA
 
Protein sequence
MYQRILVPVD GSETANKALV AALQLARESG GRVRLIHVLE ELAYLTGYEQ YGAYSGELIT 
AMRDTGAKIL DDALAVAQSA GVPADSLLCD KLGDRLAEAV ADAAKQWKAD LVVVGTHGRR
GIGRVLLGSG AEQILRLAQV PVLVIRSGES ASPAA