Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2297 |
Symbol | |
ID | 4686201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2436399 |
End bp | 2437757 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639835308 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_982526 |
Protein GI | 121605197 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.168183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTCC AGTTCCTTGG TGCAACAGAC ACCGTCACCG GGTCCAAATA CCTTCTGCGG CAGGGCAGTT CCAGCTTGCT GGTGGACTGC GGGCTGTTCC AGGGCTACAA GCAGTTGCGC CTGCGGAACT GGTCGCCGCT GCCCGTTGAG CCGGCGCGCA TCGATGCGGT CATCCTCACC CACGCGCACA TTGACCACAG CGGGTATCTG CCCTTGCTTG CCCGACAAGG CTTCAGCGGA AAGGTGTATT GCAGCCCGGC AACCTTCGAT CTGTGCAGCA TCCTGCTGCC CGATTGCGGC TACCTGCTCG AAGAAGAAGC CGAGTACCTG AACCGGCACA AGAAATCCAA ACATTCCCCG GCCTTGCCGC TCTACACCCA GGGTGACGCC CAGCGCTGCC TGAAGCTGTT CGAGCCCGTC GCCTACCGCA CCGGGTGGCA GCCCGCCGAA GGCTTGAGAG CCACGCTCAC GCCTTCGGGC CACATGCCGG GCTCGTCCTT CGTCCGGCTG GACAATGGCA CGCGCTCCAT TTTGTTTTCG GGCGACATCG GCCGGCCGAA CGATCTGGTG CTGGCCGCGC CCTCGCCCAT GGAGGGCGCC GACTACCTGG TGGTCGAGTC CACCTACGGC GACCGGCTGC ACAAAAACAC CGACGTGCTG CTGGAGCTGG CCAATGTGAT CAACCGCACG GCGGCGCGCG GCGGCGTGGT GGTGATTCCT GCGTTTGCCG TCGGGCGTGC GCAAAGCCTG CTGTACTGCA TCCACCTGCT CAAGTCGCAG GGCGTCATCC ACGACCTGCC GGTTTACCTC AACAGCCCGA TGGCCGCCAA TGCCACCCAT GTGTACGAGC GCCACCGCGC CGAGTTGCGG CTGACCGCAG CGCAATGCCG GGCCATGGCG CACAGCGCGC AGATCGTGCA TACGCCCGAA GAGTCGCGCC TGCTCAATGC GCGTCGCGGG CCGATGGTCA TCATTTCCGC CAGCGGCATG GCCACCGGCG GGCGGGTGCT CCACCACATC AAGGCGTTTG CGCCGGACAA GCGCAACACC CTCCTGTTCG CGGGCTATCA GGCCGGCGGC ACGCGCGGCG CAACCATTGC CGGCGGCGCA TCGACGGTGC GCATCTTCGG CGAGGAAGTA CCGATCCGCG CCGAGGTCGC CATGCTGTCC AGCCTGTCGG CCCACGCCGA CGGCGCGGAA ATCATTGAAT GGCTGAGAAA CTTCAAGTCA GCGCCGCGCC AGACCTTCAT CACGCATGGC GAGCCGGCTG CTGCCGACGC GATGCGCCAG CGCATCGAGC GCGAACTGCA CTGGAATTGC CACATGCCTT ATTACCTGGA ATCGGTCATG CTGGACTGA
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Protein sequence | MQLQFLGATD TVTGSKYLLR QGSSSLLVDC GLFQGYKQLR LRNWSPLPVE PARIDAVILT HAHIDHSGYL PLLARQGFSG KVYCSPATFD LCSILLPDCG YLLEEEAEYL NRHKKSKHSP ALPLYTQGDA QRCLKLFEPV AYRTGWQPAE GLRATLTPSG HMPGSSFVRL DNGTRSILFS GDIGRPNDLV LAAPSPMEGA DYLVVESTYG DRLHKNTDVL LELANVINRT AARGGVVVIP AFAVGRAQSL LYCIHLLKSQ GVIHDLPVYL NSPMAANATH VYERHRAELR LTAAQCRAMA HSAQIVHTPE ESRLLNARRG PMVIISASGM ATGGRVLHHI KAFAPDKRNT LLFAGYQAGG TRGATIAGGA STVRIFGEEV PIRAEVAMLS SLSAHADGAE IIEWLRNFKS APRQTFITHG EPAAADAMRQ RIERELHWNC HMPYYLESVM LD
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