Gene Pnap_2291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2291 
Symbol 
ID4687433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2432256 
End bp2432792 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID639835302 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_982520 
Protein GI121605191 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.27362e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTCA CGACCAAAGG CCGTTTTGCG GTCACCGCGA TGATTGATCT AGGACTGCGC 
CAGAACAATG GTCCGGTCAC GCTGGCCGCT ATCAGCCAGC GCCAGCAAAT TTCGCTGTCC
TACCTGGAGC AGTTGTTTGG CAAGCTGCGC CGCCATGAAC TGGTCGAGTC CACCCGTGGA
CCCGGCGGTG GTTACACCCT GGGCCGCAAG GCCTCCGAGA TCACCGTTGC CGACATTATC
GTTTCGGTGG ACGAGCCGAT TGATGCCACG CAGTGCGGCG GCAAGGAAAA CTGCCTGGGC
GATGGCAGCC GCTGCATGAC ACATGACCTC TGGTCTTCGC TGAATAGCCG CATGGTCGAG
TTTCTGGATT CCGTGAGCCT GCAAAAACTG GTTGATGACC AACTGGCCAA AGGCGTGATG
GTTGAAAGTA CGCCGCAAAT AAAGAAGGCC GTTTTTGCTT CGCCAGTCGT CAAACAAGTG
CGTGTTAATG CCCCCAATTC CGTCTTCGCC CTCGGCAACG CATTTTCCAA ATCCTGA
 
Protein sequence
MRLTTKGRFA VTAMIDLGLR QNNGPVTLAA ISQRQQISLS YLEQLFGKLR RHELVESTRG 
PGGGYTLGRK ASEITVADII VSVDEPIDAT QCGGKENCLG DGSRCMTHDL WSSLNSRMVE
FLDSVSLQKL VDDQLAKGVM VESTPQIKKA VFASPVVKQV RVNAPNSVFA LGNAFSKS