Gene Pnap_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2232 
Symbol 
ID4690071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2382960 
End bp2384183 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content60% 
IMG OID639835242 
Productaminotransferase AlaT 
Protein accessionYP_982461 
Protein GI121605132 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0248058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000226565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCGA TCACCAAGTC TGCAAAATTA GCCAATGTGC TTTACGACAT CCGTGGTCCG 
ATCATGGACG CGGCCAAGCA GATGGAGGAA GAGGGCCAAA AGCTCATCAA GCTCAATATA
GGCAACCTCG CGGTGTTCGG TTTTGATGCG CCTGAAGAAG TCCAGCAGGA CATGATCCGC
AACCTGCCAG CGTCAGCCGG CTATTCGGAC AGCAAGGGCA TTTTTGCAGC GCGCAAGGCG
GTGATGCACG AGACGCAAAA ACAGGGCATC AAAGGCGTGA CGCTGGACGA TATTTACCTG
GGCAACGGCG CCAGCGAGTT GATCTCGATG GCCACCAATG CCTTGCTCGA CAACGGCGAC
GAATTGCTGC TGCCTTCGCC CGACTACCCC CTGTGGACCG CTTCGGTCAG CCTGGCCGGT
GGCACGCCGG TTCACTACAG GTGCGACGAG AGCAACGGCT GGATGCCCGA TCTGGACGAC
ATCCGCGCCA GGATCACGCC CGCTACCCGG GGCATCGTCG TCATCAACCC CAACAACCCG
ACCGGCGCGC TGTATTCCGA CGAACTGCTG AAAAGCATCG TGGAGATTGC GCGTGAACAC
AATCTGGTGA TTCTGGCCGA CGAGGTCTAT GACAAGGTGC TGTACGACGG CGTGAAGCAC
ACGGCCCTGG CCAGCCTGTC CACCGATGTG CTGACGCTGA CCTTCAATTC GCTCTCCAAG
AGCTACCGTT CCTGCGGCTA CCGCGCCGGC TGGCTGGTGG TGTCAGGACC GAAGAAGAGG
GCGCAAGACT ACATCGAAGG CTTGAACATG CTGGCCAACA TGAAGCTGTG CTCGAATGTG
CCGGGCCAGT GGGCCATCCA GACGGCTTTG GGCGGCTACC AGAGCATCAA TGACCTGGTG
GGCGAGGGCG GCCGGCTGCG GCGCCAGCGC GACCTGGCTT ACGAGCTGAT CACCGCCATT
CCGGGCGTCA CCTGCGTCAA GCCGAGCGCG GCGCTCTACA TGTTTCCCCG GCTGGATCCC
GTGATTTACC CGATCACCGA CGACCGGCAG TTTTTCCTTG AACTGCTCAA GGAAACCAAG
GTCATGCTGG TGCAGGGCAC CGGCTTCAAC TGGGCCGCGC CCGACCATTT CCGGATTGTC
TTCTTGCCGC ATGAGGAAGA CCTTCGCGAA GCCATCAACC GCATTGCCCT GTTTCTTGAG
AAATACCGCA ACAAGCTGAT CTGA
 
Protein sequence
MKPITKSAKL ANVLYDIRGP IMDAAKQMEE EGQKLIKLNI GNLAVFGFDA PEEVQQDMIR 
NLPASAGYSD SKGIFAARKA VMHETQKQGI KGVTLDDIYL GNGASELISM ATNALLDNGD
ELLLPSPDYP LWTASVSLAG GTPVHYRCDE SNGWMPDLDD IRARITPATR GIVVINPNNP
TGALYSDELL KSIVEIAREH NLVILADEVY DKVLYDGVKH TALASLSTDV LTLTFNSLSK
SYRSCGYRAG WLVVSGPKKR AQDYIEGLNM LANMKLCSNV PGQWAIQTAL GGYQSINDLV
GEGGRLRRQR DLAYELITAI PGVTCVKPSA ALYMFPRLDP VIYPITDDRQ FFLELLKETK
VMLVQGTGFN WAAPDHFRIV FLPHEEDLRE AINRIALFLE KYRNKLI