Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2232 |
Symbol | |
ID | 4690071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2382960 |
End bp | 2384183 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639835242 |
Product | aminotransferase AlaT |
Protein accession | YP_982461 |
Protein GI | 121605132 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0248058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000226565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACCGA TCACCAAGTC TGCAAAATTA GCCAATGTGC TTTACGACAT CCGTGGTCCG ATCATGGACG CGGCCAAGCA GATGGAGGAA GAGGGCCAAA AGCTCATCAA GCTCAATATA GGCAACCTCG CGGTGTTCGG TTTTGATGCG CCTGAAGAAG TCCAGCAGGA CATGATCCGC AACCTGCCAG CGTCAGCCGG CTATTCGGAC AGCAAGGGCA TTTTTGCAGC GCGCAAGGCG GTGATGCACG AGACGCAAAA ACAGGGCATC AAAGGCGTGA CGCTGGACGA TATTTACCTG GGCAACGGCG CCAGCGAGTT GATCTCGATG GCCACCAATG CCTTGCTCGA CAACGGCGAC GAATTGCTGC TGCCTTCGCC CGACTACCCC CTGTGGACCG CTTCGGTCAG CCTGGCCGGT GGCACGCCGG TTCACTACAG GTGCGACGAG AGCAACGGCT GGATGCCCGA TCTGGACGAC ATCCGCGCCA GGATCACGCC CGCTACCCGG GGCATCGTCG TCATCAACCC CAACAACCCG ACCGGCGCGC TGTATTCCGA CGAACTGCTG AAAAGCATCG TGGAGATTGC GCGTGAACAC AATCTGGTGA TTCTGGCCGA CGAGGTCTAT GACAAGGTGC TGTACGACGG CGTGAAGCAC ACGGCCCTGG CCAGCCTGTC CACCGATGTG CTGACGCTGA CCTTCAATTC GCTCTCCAAG AGCTACCGTT CCTGCGGCTA CCGCGCCGGC TGGCTGGTGG TGTCAGGACC GAAGAAGAGG GCGCAAGACT ACATCGAAGG CTTGAACATG CTGGCCAACA TGAAGCTGTG CTCGAATGTG CCGGGCCAGT GGGCCATCCA GACGGCTTTG GGCGGCTACC AGAGCATCAA TGACCTGGTG GGCGAGGGCG GCCGGCTGCG GCGCCAGCGC GACCTGGCTT ACGAGCTGAT CACCGCCATT CCGGGCGTCA CCTGCGTCAA GCCGAGCGCG GCGCTCTACA TGTTTCCCCG GCTGGATCCC GTGATTTACC CGATCACCGA CGACCGGCAG TTTTTCCTTG AACTGCTCAA GGAAACCAAG GTCATGCTGG TGCAGGGCAC CGGCTTCAAC TGGGCCGCGC CCGACCATTT CCGGATTGTC TTCTTGCCGC ATGAGGAAGA CCTTCGCGAA GCCATCAACC GCATTGCCCT GTTTCTTGAG AAATACCGCA ACAAGCTGAT CTGA
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Protein sequence | MKPITKSAKL ANVLYDIRGP IMDAAKQMEE EGQKLIKLNI GNLAVFGFDA PEEVQQDMIR NLPASAGYSD SKGIFAARKA VMHETQKQGI KGVTLDDIYL GNGASELISM ATNALLDNGD ELLLPSPDYP LWTASVSLAG GTPVHYRCDE SNGWMPDLDD IRARITPATR GIVVINPNNP TGALYSDELL KSIVEIAREH NLVILADEVY DKVLYDGVKH TALASLSTDV LTLTFNSLSK SYRSCGYRAG WLVVSGPKKR AQDYIEGLNM LANMKLCSNV PGQWAIQTAL GGYQSINDLV GEGGRLRRQR DLAYELITAI PGVTCVKPSA ALYMFPRLDP VIYPITDDRQ FFLELLKETK VMLVQGTGFN WAAPDHFRIV FLPHEEDLRE AINRIALFLE KYRNKLI
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