| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2225 |
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| Symbol | |
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| ID | 4687863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2374721 |
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| End bp | 2377324 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639835235 |
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| Product | ATPase |
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| Protein accession | YP_982454 |
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| Protein GI | 121605125 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00451076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGACAAG ACAAACTCAC CACCAAGTTC CAGGAAGCCC TGAGCGACGC CCAGTCGCTG
GCGCTGGGCA ACGACAACGG CTATATCGAG CCGGCGCACC TGCTGGCGGC GATGCTGCGC
CAGGAAGACG GTCCGCGCGC GCTGCTGGAG CGGGCTGGCG TCAACGTCAA CGGCTTGATG
CAGGCGGCCG ATGCAGCGGT CAAGAAACTG CCGCAGGTGC AGGGCCAGGA CCAGATCCAG
GTCGGCCCCG AATTGGCCAA GCTGCTGCAG GCCACTGAAA AGGAATCCAT CAAGCGCAAT
GACCAGTTCA TTGCCGGTGA GCTGTTTTTG CTCGCCCTGA CCGACAGCAA GGCCGACGTG
GGCAAGATTG CCCGCGAAAA CGGCTTGAGC CGCAAGGCGC TGGAAGCGGC GATTGACGCC
GTGCGCGGCG GCCAGAACGT CAACAGCGCC GACGCCGAAG GCCAGCGCGA AGCCCTGAAA
AAATACTGCA TGGACCTGAC AGAGCGCGCG CGCCTGGGCA AGCTCGACCC GGTGATTGGC
CGCGACGATG AGATCCGCCG CGCCATCCAG GTCTTGCAGC GCCGCACCAA GAACAATCCC
GTCCTGATCG GCGAGCCCGG CGTCGGCAAG ACGGCGATTG TCGAAGGCCT GGCCCAGCGC
ATCGTCGCCG GCGAGGTGCC CGATTCGCTC AAGGGCAAGC GCGTGCTGTC GCTCGACATG
GCCGCGCTGG TGGCCGGCGC CAAGTTCCGC GGCGAGTTCG AGGAACGGCT GAAAACCGTG
CTCAATGAAC TGGCCAAGGA AGAAGGCCAG ACCATCGTCT TCATCGACGA GTTGCACACC
ATGGTCGGCG CGGGCAAGGC CGAGGGCGCG ATGGATGCGG GCAACATGCT CAAGCCGGCG
CTGGCGCGCG GCGAGTTGCA CTGCGTCGGC GCGACCACGC TCGACGAATA CCGCAAGTAC
ATCGAAAAAG ACGCCGCGCT GGAGCGCCGC TTCCAGAAAA TCCTGGTCGG CGAGCCGACC
GTTGAGGCGA CGATTGCCAT TCTGCGCGGC CTGCAGGAAA AGTACGAAAC CCACCACGGC
GTGCAGATCA CCGACCCGGC CATCGTCGCG GCGGCCGAAC TCAGCCACCG CTACATCACC
GACCGCTTCC TGCCCGACAA GGCGATTGAC CTGATCGACG AGGCCGCCGC CAAGGTCAAG
ATCGAGATCG ACTCCAAGCC CGAGGTCATG GACCGGCTCG ACCGCCGGCT GATCCAGTTG
CAGATCGAGC GCGAAGCCGT GCGCCGCGAA AAGGACGAAG CCTCGCAAAA GCGCTTTGGC
CTGATCGAGG AGGAAATCGG CAAGCTGCAA AAGGAAATCT CCGACATGGA TGAAATCTGG
CAGGCCGAGA AAGCCCAGGC GCTGGGCTCC AAGGACGTGA TGGAGGAAAT CGACACCATC
AACACGCAGA TCGAGGAATT CACCCGCAAG GGCGACTTCA ACAAGGTGGC CGAACTGCAG
TACGGCAAGC TGCCCGAGCT AAAAAAGCGC CTCAAGCAGG CGCAGGACAC CGAGGAGAGC
AAAGGCGTGG ACGACAAGCC CCGGCTGCTG CGCACGCAGG TCGGCGCCGA GGAAATCGCC
GAAGTCGTGA GCCGCGCCAC GGGCATTCCG GTGGCCAAGA TGATGCAGGG CGAAAAAGAC
AAGCTGCTGC AGATGGAAGG CAAGCTGCAC GAGCGCGTGG TCGGCCAGGA CGAGGCGATT
GGCGCGGTGG CCAACGCGAT TCGCCGCTCG CGCTCGGGCC TCTCGGACCC GAACCGGCCA
ACGGGTTCAT TCCTGTTCCT TGGCCCCACG GGCGTCGGCA AGACCGAGCT GTGCAAGGCG
CTGGCCGGCT TTCTGTTCGA CAGCGAAGAC CATCTGGTCC GCATCGACAT GAGCGAGTTC
ATGGAAAAGC ATTCGGTCGC CCGCCTGATC GGCGCGCCGC CGGGCTACGT GGGCTACGAG
GAGGGCGGCT ACCTGACCGA AGCGGTGCGC CGCAAGCCTT ACAGCGTGCT GCTGCTCGAC
GAGGTCGAAA AAGCGCACCC GGACGTGTTC AACGTGCTGC TGCAGGTGCT GGATGATGGC
CGGCTGACCG ATGGCCAGGG GCGCACGGTC GATTTCAAGA ACACCGTGAT CGTCATGACC
AGCAACATCG GCTCGCCGAT CATCCAGTCG ATGGTCGGCC AGCCGTATGA GGAGATCAAG
GACGCGGTCA CCGACGAGTT GAAGAACTAT TTCCGACCCG AGTTTTTGAA CCGCATCGAC
GAGACGGTCG TGTTCCATGC GCTCGACGCG AAGAACATCG AGTCGATTGC CCGCATCCAG
CTCAAGGTGC TCCTGGCCCG CCTGGCCAAG ATGGACCTGG TGCTCGACGT GTCGGAAGCG
GCGATTGGCG AGCTGGCCAA GGTCGGGTTC GACCCGGTGT TCGGCGCGCG GCCGCTCAAG
CGCGCGATCC AGCAGCGGAT TGAAAACCCG CTGTCAAAAC TGCTGCTGGA AGGCCGTTTT
CCGCCCAAGA GCACCATTCA CGTCGATGTG GACCCGATCC TCAATCCGGG CGTGTTCAGG
TTTGGCGAGG CGCAGCCAGC CTGA
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| Protein sequence | MRQDKLTTKF QEALSDAQSL ALGNDNGYIE PAHLLAAMLR QEDGPRALLE RAGVNVNGLM
QAADAAVKKL PQVQGQDQIQ VGPELAKLLQ ATEKESIKRN DQFIAGELFL LALTDSKADV
GKIARENGLS RKALEAAIDA VRGGQNVNSA DAEGQREALK KYCMDLTERA RLGKLDPVIG
RDDEIRRAIQ VLQRRTKNNP VLIGEPGVGK TAIVEGLAQR IVAGEVPDSL KGKRVLSLDM
AALVAGAKFR GEFEERLKTV LNELAKEEGQ TIVFIDELHT MVGAGKAEGA MDAGNMLKPA
LARGELHCVG ATTLDEYRKY IEKDAALERR FQKILVGEPT VEATIAILRG LQEKYETHHG
VQITDPAIVA AAELSHRYIT DRFLPDKAID LIDEAAAKVK IEIDSKPEVM DRLDRRLIQL
QIEREAVRRE KDEASQKRFG LIEEEIGKLQ KEISDMDEIW QAEKAQALGS KDVMEEIDTI
NTQIEEFTRK GDFNKVAELQ YGKLPELKKR LKQAQDTEES KGVDDKPRLL RTQVGAEEIA
EVVSRATGIP VAKMMQGEKD KLLQMEGKLH ERVVGQDEAI GAVANAIRRS RSGLSDPNRP
TGSFLFLGPT GVGKTELCKA LAGFLFDSED HLVRIDMSEF MEKHSVARLI GAPPGYVGYE
EGGYLTEAVR RKPYSVLLLD EVEKAHPDVF NVLLQVLDDG RLTDGQGRTV DFKNTVIVMT
SNIGSPIIQS MVGQPYEEIK DAVTDELKNY FRPEFLNRID ETVVFHALDA KNIESIARIQ
LKVLLARLAK MDLVLDVSEA AIGELAKVGF DPVFGARPLK RAIQQRIENP LSKLLLEGRF
PPKSTIHVDV DPILNPGVFR FGEAQPA
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