Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2213 |
Symbol | |
ID | 4686270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 2362240 |
End bp | 2363982 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639835223 |
Product | Fis family transcriptional regulator |
Protein accession | YP_982442 |
Protein GI | 121605113 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.851331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.770524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCA TCGTTCGGGA CGGCAGAGGG CAGGGCACAA TAAAGCGCAT GACCCAACAA CTTGCCGGCC ATCTTCTTGT TGACTGCCTC CTGGCCCAGG GCGTCACCCA TGCATTCGGC GTTCCGGGCG AAAGCTACCT GGCGGTGCTT GACGGGCTGC ATGCGCGCCG GGACCAGATC CGCTTCATCA CCTGCCGCCA GGAGGGTGGC GCGGCCTTCA TGGCCGAAGC CCACGGCAAG CTGACCGGAC GCCCCGGCGT GTGCATGGTC ACGCGCGGGC CGGGCGCGAC CAATGCCTCC ATCGGCGTGC ACACGGCTTT CCAGGATTCG ACGCCGATGG TGCTGCTGGT CGGCGACGTG GCCAGCGACT GCCGTGACCG CGAGGCTTTC CAGGAAGTGG ACTATTCGAG CTTTTTCGGC CCCAGTACCA AGGGCTTTGC CAAGCGCGTC GAGCGCATCG ATGACGCCGA CCGCATTCCC GAATACGTGG CGCGCGCCTT TGCCACGGCG ATGAACGGCC GGCCCGGCCC GGTGGTGCTG GTGCTGCCCG AGGACATGCT GACGCGCATG ACCGCTGCCC GGCCCTTGCC ACGGGTGGAA GCGGTGCAGG CCTGGAGCGA CCCCGGCGCC CTGCGCACGC TGCGCGAGAT GCTGCTGGCG TCAAAGCAGC CGCTGATCAT CGCGGGCGGC GGTGGCTGGA CGCCGCAGTC GGCGCAGGCC TTGCAGCGCT TTGCCGAAAA CTGGAAGCTG CCGGTCGGCA ACGCCTTTCG CTTCCAGGAC ACGTTTGACA ACCACCACCC GCTGTATGCC GGCGATGTGG GCATCGGCCT GAGTCCGAAA CTGGCTGCGC GCGTCAAGGC CAGCGACCTG ATCATTGCCA TCGGCCCGCG CCTGGGCGAA ATGACGACCG GCAACTACAC GCTGATCGAA GCGCCCCGGC CGAAGCAGAA ACTGGTGCAT ATCCACGCCA GCGCCGAGGA ACTCAACCGC GTGTTCCAGG CCGACCTGGC GATCAACGCG ACCATGAATG CCGCCGCGCG TTCGCTCGAA GTCTTGAGCG CGCCGGTATC GGTGCCGTGG GAAGCCTGGA CGGCGTCGGC CAACGAAGAC TACCTGGCCA ACCTGGTGCC GCAAGCCTTG CCGGGCGACG TCGACATGCC GGCCATCGTC GGCCTGCTGC AGCGCTATCT GCCGGCGGAT GCCGTGCTGA CCAACGGCGC AGGCAATTTC GCCAGCTGGA TTCACCGTTT TTTCAAGCAC CACGGGCTGG CCAAGGGACA CAAGACGCAG CTCGCGCCCA CCGTCGGCGC GATGGGCTAC GGCGTGCCGG CCGGCATTGC GGCGGCCATC ACGACCGGGC GTGTCGCTTT CACGATTGCC GGCGACGGCG ACTTCCTGAT GAACGGGCAA GAGCTGGCCA CCGCCGTTCA GCACGGCGCC AAAAGCATCA TCGTGCTGCT CAACAACGGC ATGTACGGCA CCATCCGCAT GCACCAGGAA AAGCAGTATC CGCAGCATGA AAGCGGCTCG CGCCTGAACA ACCCGGACTT TGCGGCGCTG GCGCGCGCCT ACGGTTATGC CGGCGTGCGC ATCACCCGCA CGGACGAATT CGAGGCCGAA CTGCTGGCCG CGCTGGATCG GTCCGAAGGC ACGCTGATCG AGGTGACACT GGACCCGGAA GTCATCACCA CACGCGCCAC GCTGTCATCC ATCACGCAGG GCGCGCTGAA ACAGAAGCTA TAA
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Protein sequence | MAAIVRDGRG QGTIKRMTQQ LAGHLLVDCL LAQGVTHAFG VPGESYLAVL DGLHARRDQI RFITCRQEGG AAFMAEAHGK LTGRPGVCMV TRGPGATNAS IGVHTAFQDS TPMVLLVGDV ASDCRDREAF QEVDYSSFFG PSTKGFAKRV ERIDDADRIP EYVARAFATA MNGRPGPVVL VLPEDMLTRM TAARPLPRVE AVQAWSDPGA LRTLREMLLA SKQPLIIAGG GGWTPQSAQA LQRFAENWKL PVGNAFRFQD TFDNHHPLYA GDVGIGLSPK LAARVKASDL IIAIGPRLGE MTTGNYTLIE APRPKQKLVH IHASAEELNR VFQADLAINA TMNAAARSLE VLSAPVSVPW EAWTASANED YLANLVPQAL PGDVDMPAIV GLLQRYLPAD AVLTNGAGNF ASWIHRFFKH HGLAKGHKTQ LAPTVGAMGY GVPAGIAAAI TTGRVAFTIA GDGDFLMNGQ ELATAVQHGA KSIIVLLNNG MYGTIRMHQE KQYPQHESGS RLNNPDFAAL ARAYGYAGVR ITRTDEFEAE LLAALDRSEG TLIEVTLDPE VITTRATLSS ITQGALKQKL
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