| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2193 |
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| Symbol | |
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| ID | 4686636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2337008 |
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| End bp | 2340319 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639835203 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_982422 |
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| Protein GI | 121605093 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCG CTTACGAATG CAACGGCCAG CCCGTTTCCG CCGACGCTTT TTACGCCATC
GCCTGCGATC CGCGCCGCAG CGTGGCCATC GAGGCCTGCG CTGGCGCGGG CAAGACCTGG
ATGCTGGTGT CGCGCATCGT GCGGGCGCTG CTCGATGGCG CCAACGCCCC GGACCCTGCC
TCCGGCACGC CGCGCGAGCC GGTGCGGCCG CATGAAATCC TGGCCATCAC CTTCACCAAG
AAGGCCGCCG GCGAAATGCG CGAGCGGCTT GACGAGTGGC TGCAAAAATT CACCCATGCC
GACGACGAGA CCCTGCGCCA GGAACTCATC ATGCGCGGCG TTTCAAGCCA AAAGAGCCTG
CAGTCCAATG CGGACATGCG CCGGCAGCTG TCAAATCTAT ACCGCTCCAT GCTCGCCAGC
GGGCGGGCTG TGCAGATCCG CACCTTTCAC AGCTGGTTCG CCGCCTTGCT GCGCAGCGCG
CCCGTGGCGG TGCTGCACCG GCTGGGCATG CCGGTGAATT ACCAGTTGCT CGAAGACGAC
GCCCCCGCCC GGGCGCTGGT GTGGCGCCGC TTTTATGCGG CGCTTGCCAA GGACGCGCTG
CTGAAGGCCG ACTTCGAGGC GCTGGTGCTG GGCCACGGCC GCCACCAAGC CGACAAGGCC
CTGCAGTCCG CGCTGGACAA GCGCACCGAG TTTGTGCTGG CTGACGAAAA AGGCGTGGTC
GATGCGTCGG TGCAGCCTTT TGATGTGCAG TTCCCGGAGT TCGCGGGGCT GGCCGCGCCG
CAGGACTGCC TGGCGCCGGG TGGCCCGCAC CACGGCCTGC TGCTCGCGGC CGCCAAGGCG
CTGGGCCGCG CCAGTGCGCC CAGCTTTTCC GCCAAGGGCG TGGAACTGGA GCAAGCCCTG
GGTGCGCAGG ACCGGCCCGG CATCTTCAGC GCGCTGCTGA CCGACAAGGG AACGCCGCGC
AAATTCGGCG ACAAAATCGT CGGCATCGAC ACCGTGCGGC AGGCGCAGGA ACTGGTGCTG
CGGGTGCAGG CGGCCTGCCA GCAGCACGAG GCGTGGCTTC ACCAGCAGCG CATGGCCCGC
CTGAGCCGCC TGCTGATCGC GCAGTACAAC CAGCTCAAGC GCGAACATGG CTGGGTCGAT
ATGAACGATG TCGAGCGGGC CGCGCTGGTC ATGCTCGGCG ACCCGGTGCT CGCCGGCTGG
GTGCAGGAGC GGCTGGACGC GCGCATCAAG CACCTGATGA TCGACGAGTT CCAGGACACC
AATCCGCTGC AATGGCAGGC GCTGTCGGCC TGGCTGAGCG GCTACGGCGG CGCGGGCGCG
GCGCCCAGCG TGTTTTTGGT CGGCGACCCC AAGCAGAGCA TTTACCGCTT TCGCCGCGCC
GAGCCGCAGG TGTTCCGCGC CGCGCAGGCC TTCGTGGTCG AGGGGCTGGG CGGCGACTTG
CTCAGCTGCG ACCACACGCG CCGCAACGCG CTGGCCGTCA TCGACACGGT CAACGCCGTC
ATGGGCCATG CGCGCACGGT GGACGGCTAC GACGGCTTTC GCGAGCACAC CACCGATTCG
GCCAAAGCCG GCGCGACCGG CTGCCTGCCG GCGATTTCCC GGCAGCGGGA GGGTGCAGAC
GCAGACACGT CGCCGGAGGC GGGCTGGCGC GACAGCCTGA GCACGCCGCG CGAACTGCCC
GAGGAAACCC TGCGCACGCT GGAGGCGCGC CAGGCCGCCG CCTGGATCTC GCGGCAGCTG
GCCACCGGCC TGAAACCATC GGACGTGATG GTCCTGTCGC GCAAGCGGGC CGGCCTGCTG
CCGCTGCAGG AAGCCTTGCG CGCGCTGCAC ATTGCGGCCC AGATCGGCGA GAAAACCGAC
CTGATCGACT GCTGCGAAGT ATTGGATGTG GTGGCGCTGC TCGACGTGCT GGTGTCGCCG
CAGCACGATT TGTCGTTGGC CCGGGCGCTG CGCTCGCCGC TGTTCGGCCT GCTTGATGCC
AGCCTGGTGC AACTGGCGCT GCTGCAAAAG GAGTTGAAGC TGCCCTGGTC TGAGCTGCTA
CAAAAAACAG AGCTGCTGGC GCCCGAGCTG CATGCGCTGG TGCCCTTTTT GGCTCGATGG
AAGGGCTGGC TGGACAGCCT GCCGCCGCAT GACGCCCTGC AAAAGATGTA CGACGATGGC
GATGTGCTGG CGCGCTTTGC CGCCGCCGCG CCCGCCGCCC AGCGCCCGGC GGTGTTGGCC
AACCTGCGCG CGCTGCTGGG CGTGGCGCTG GGGCGCGATG GCGGGCGCTA TGCCACGCCC
TACGGGCTGA TCCGGGCGCT CAAGGCTGGC GGCCTGCTGG CGCCGGTGGC GGTCAACGAT
GCGGCCGTGC GCCTGCTGAC GATCCACGGC GCCAAGGGCC TGGAGGCCGA GGCCGTGCTG
CTGCTGGACA CCGACACCGC CCCGCGCAAC GCCGACAGCA TGGGCGTGCT CGTGGACTGG
CCCGGCGAAG CCACCGAGCC GCGCAAGTTT GTCTTTCTGG TCAGCGAAGC CAGACCGCCG
GCCTGCGCGC AGGAAGCGCT GGCCGCCGAG CAGGCCGCCC GCAAGCGCGA GGAACTCAAC
GCCCTGTATG TCGCCATGAC GCGCGCCCGG CACACGCTGG CGATTTCCTC CATCGAGCCG
CACCGCGCGA CCATCGACAG CTGGTGGCAG CGCCTGCAGG GGCAAGTGCC GCCGCTGGAT
GCCCCGGCCC CGCCTGACTC CCTCGGGGAG AAGGCCGACG GTGCCGGCCA GGAAGGCGCG
GCTGGCTTCC CAGCCCCGGC CGCCGAGGTT TTTTACCTGC CCGAACTTCC CGCCTTCGAG
CCGCCCGCCC CCGAGCCGGC CGCCGAAGGG TCGGTGGCAG AAGACCCGGC CAATGCCCGC
GTCGGCAAGG CCATGCACCG CCTGCTGGAG TGGGGCGGGC GCTCGTCGGC CGAACATGTG
GGCGCGGTGG CGCGCGAGTT CCGCCTCAAC CCGGCGCAGG CGCAGGAGGC TTGCGCGCTG
GCGCAATGCA TTTTGAAAGG CGAGGGCGCC TGGGCCTGGA GCAACGAGGC CGTCGCCTGG
CACGGCGACG AAATCGACCT GGTGTACCAG GGCCTGCCGC TGCGACTGGA CCGCCTGGTG
CGGCGCAAGG ACGCCGGCTT CGAGGGCCAG TGGTGGGTGC TCGACTACAA ATCGGCCCCC
GAGCCCGAAC TGCAGCCCGC GCTGATCACC AAGATGCGCA TCTACCGCGC CGCCGTGCAG
CGCATCTACC CGAGAGCGAC CGTGAAGGCT GCCTTCCTGA CCGGGCGGGG CACGGTGGTG
GAACTGGCCT GA
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| Protein sequence | MTAAYECNGQ PVSADAFYAI ACDPRRSVAI EACAGAGKTW MLVSRIVRAL LDGANAPDPA
SGTPREPVRP HEILAITFTK KAAGEMRERL DEWLQKFTHA DDETLRQELI MRGVSSQKSL
QSNADMRRQL SNLYRSMLAS GRAVQIRTFH SWFAALLRSA PVAVLHRLGM PVNYQLLEDD
APARALVWRR FYAALAKDAL LKADFEALVL GHGRHQADKA LQSALDKRTE FVLADEKGVV
DASVQPFDVQ FPEFAGLAAP QDCLAPGGPH HGLLLAAAKA LGRASAPSFS AKGVELEQAL
GAQDRPGIFS ALLTDKGTPR KFGDKIVGID TVRQAQELVL RVQAACQQHE AWLHQQRMAR
LSRLLIAQYN QLKREHGWVD MNDVERAALV MLGDPVLAGW VQERLDARIK HLMIDEFQDT
NPLQWQALSA WLSGYGGAGA APSVFLVGDP KQSIYRFRRA EPQVFRAAQA FVVEGLGGDL
LSCDHTRRNA LAVIDTVNAV MGHARTVDGY DGFREHTTDS AKAGATGCLP AISRQREGAD
ADTSPEAGWR DSLSTPRELP EETLRTLEAR QAAAWISRQL ATGLKPSDVM VLSRKRAGLL
PLQEALRALH IAAQIGEKTD LIDCCEVLDV VALLDVLVSP QHDLSLARAL RSPLFGLLDA
SLVQLALLQK ELKLPWSELL QKTELLAPEL HALVPFLARW KGWLDSLPPH DALQKMYDDG
DVLARFAAAA PAAQRPAVLA NLRALLGVAL GRDGGRYATP YGLIRALKAG GLLAPVAVND
AAVRLLTIHG AKGLEAEAVL LLDTDTAPRN ADSMGVLVDW PGEATEPRKF VFLVSEARPP
ACAQEALAAE QAARKREELN ALYVAMTRAR HTLAISSIEP HRATIDSWWQ RLQGQVPPLD
APAPPDSLGE KADGAGQEGA AGFPAPAAEV FYLPELPAFE PPAPEPAAEG SVAEDPANAR
VGKAMHRLLE WGGRSSAEHV GAVAREFRLN PAQAQEACAL AQCILKGEGA WAWSNEAVAW
HGDEIDLVYQ GLPLRLDRLV RRKDAGFEGQ WWVLDYKSAP EPELQPALIT KMRIYRAAVQ
RIYPRATVKA AFLTGRGTVV ELA
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