Gene Pnap_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2183 
Symbol 
ID4686869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2325804 
End bp2328968 
Gene Length3165 bp 
Protein Length1054 aa 
Translation table11 
GC content65% 
IMG OID639835193 
Productacriflavin resistance protein 
Protein accessionYP_982412 
Protein GI121605083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3696] Putative silver efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCT GGATCATCGG CTCAAGCCTT AAATTTCGTT TCCTGGTGCT GGCCATCGCC 
GCCATGCTGC TGTTCTTCGG AACCCAGCAA CTGCGCAAGA TGCCGGTCGA TGTGTTCCCT
GAGTTCGCGC CGCCCAAGGT CGAAATCCAG ACCGAAGGCC CCGGCATGAC CGCCACCGAG
GTCGAGGAAC TCATCACCAT CCCCATGGAA GACCAGATGC GCGGCGTGCC GGGCGTGCAG
TACGTCCGCT CCTCGTCGGT GACGGGGCTG TCGCAGGTGG TGCTGCTGTT CAAGATGGGC
AGCGACCTCA TGGACGCGCG GCAACGCGTG CAGGAGCGCC TGAAGCTGGC GATTGCCGAG
CTGCCCAAGT CGTCCGGCAT GCCGGTGATA CTGCAGCCGC TGTCCTCGAC CAGCCGGGTC
ATGAAGATCG GGCTTTCATC GAAGGTCCAC GACCAGATGG ACCTGTCGAT GATCGCCTAC
TGGACGATCA AGTTCCGGCT CATGTCCGTG CCCGGCGTGG CCAGCATTCC CATGTGGGGC
GACCAGATCA AGTCCCTGCA GGTGCAGGTG GACCCCAGCC TGATGCGCGC CCACAATGTC
ACGCTCGACG AGGTCATGGA GACCACCTCG GACGCGCTGG ACATCGGCAT GCTGACCTAC
AGCTCCGGGG GCAAGGCGCG CATCGACGGG ATGATCGACA CGCCCAACCA GCGGCTCGCC
ATCCATAACG AGTCGCCGGT GTTTTCGGTC GAGCATCTGG CGCAGGTGCC GCTTTCCCTC
AAGGGCCGTC GCCCTGATCC GCCGCGGCTG GGCGATGTGG GCAAGGTGGT GTGGGACACC
TGGCCCCTGA TCGGGGACGC CGTCATCAAC GACGGGCATG GCCTGATGAT GATCGTCGAG
AAGCTGCCGT GGGCCAACAC GCTGGAAGTC ACGCGCGGCG TCGAGGAAGC GCTGGCGGCA
TTGAAACCGG GTCTGCCCGG CGTCGAGATC GACTCCACGA TCTTCCGGCC GGCGACCTTC
ATCGACCTGT CGATGCAGAA TCTGACGCGG GCGCTGATCA TCGGCTGCCT GCTGGTGGTC
ATCGTCCTGG GCGCCTTCCT GTATGAATGG CGGGTGGCGC TGATCAGCGT GATTGCGATT
CCGCTGTCCC TGGTGACGGC CGGGCTGGTG CTCTACCAGA TGGGCGCGAC GATCAACACG
ATGGTGCTGG CCGGCTTCAT TGTCGCCCTC GGTGATGTCG TGGACGACGC GATCATCGAT
GTCGAGAACA TCGTGCGGCG GCTGCGCCAG CACCGGCTGG CGGGCAGCGG CAAATCAACC
GCGCGCATCA TCCTGGAAGC GTCCCTTGAG GTGCGTTCGG CCATCGTCCA TGCCACGGTG
ATCGTCGTGC TGGCCGTGAC GCCGGTGTTC TTCATGGGCG GGCTGTCGGG GGTGTTCTTC
GAACCGCTGG TGCTGGCCTA TCTGGTGGCG ATGCTGGCGT CGATGGTGGT GGCGCTGACG
GTGACGCCGG CCCTGTCCTT GCTGCTGCTC AATCGCGCCG GCATCGAGCA CCGGCAGTCG
CCGCTGGTGC CGTGGCTCAA GCGCCATTAC GGCGCGATGC TGTCACGGGC CATCCAGGCG
CCACGCGCGA CCTTCGCCGC CGCCCTCATC CTTGTCGTCG CGGCCATCGG CGTCTGGCCT
TTCCTGGGCG CGTCGCTGCT GCCGGCGTTC AAGGAACGGG ATTTCCTGAT GCATTGGGTT
CCCCCCGAGG GAACCTCGCA CCCGGAGACG TTCAGGATCA CCCAGGCGGC CAGCCGCGAG
CTGCGCGCCA TTCCGGGCGT GCGCAACTTC GGCGCCCACA TCGGACGCGC CGTGGGCGGG
GATGAACCCT ACGGCGTGAA TTTCACCGAG AACTGGATCA GCATCGATCC GAAGGCCGAC
TACGACCAGA CGCGCGCGAG CGTCGAGGCC GCCGTCGCCG GCTACCCCGG GCTGTACCGC
GACGTGCAGA CCTACCTGAA AGAGCGCATC AAGGAGGTGC TGACCGGGGC TGGCGAATCC
ATTGTGGTGC GCATCTTCGG CCCCGAGCTG TCGGTGCTGC GGGACAGGGC GCACGACGTG
GAAACCGCGC TGAAGGATAT TCCCGGCCTC ATTGATCTGC ATCTGGAGCA GCAGGTCGAT
ATGCCCCAGG TGCAGGTCAA GGTGAACCTT GAAAAAGCCG CCCGCTACGG AATCAAGCCC
GGCGACGTGC GCCGCGTGGT GAATGTGCTG ATGTCGGGCA TCGAAGTCAC CGACATCCAC
CGGGGCGGCA AGGTCTATGA CGTCTTTGTG TGGACGGCGC CGTCGGTGCG CAACAACGTG
GACGACATTC GCGAGTTCCT GATCGACACG CCTTATGGCG GGCGCGTGCG GATCGCCGAG
GTGGCGGATG TCAGGATCGC GGCGACACCG AACAAGATCA AGCGCGAAAA CAACTCGCGG
CGGATTGATG TTCACGCCAA CGTCAAGGGG CGCGACCTGG GCGCGGTGGC GAACGAGGTC
GAGGCCCGCC TTTCAAAAAT CAGTTTCCCG ATGGGCTACT ACCCGCAGCT GCTGGGCGAG
TACAAGGAGC GCCAGTCGGC GCAAAGGAAT CTGCTGGTCG CCTCGGTGTT CGCTGTCGTG
GCGATATTCC TGATTCTCCA TGCGACCTTC CGCAATTTCC GGCTCGCCGG CATGATCTTC
CTCGCCCTCC CGGCGGCGCT GGTCGGCGCG GTGCTGGCGA CCTTCGCCGC CGACCGGGTC
ATCTCGCTCG GCTCGCTGGT GGGCATCATC ACCATCCTGG GCCTGTCGGC GCGCAACGGC
ATCATGCTGA TCGAGCACTG CCGCTACCTC CAGCAGGAGG AAGGCGAGCC CTTCGGTATC
GGGCTGGTTT TGCGCGGGGC CAGCGAGCGC CTGTCGCCGA TCCTCATGAC CACCCTGTGC
ACAGCCCTGG CGCTGCTGCC GCTGATTGTT CCAGGCAGTA TTCCCGGCCA CGAGATCGAG
CACCCGATGG CGGTCGCCAT TCTGGGCGGC ATCATCACCT CGTCCCTGCT GAGCCTGTTC
GTCGTGCCGA TCCTGTACCT GCGCCATGGC GGCAGTTCCG GCGAGCCGAG CGATGCTCTG
CCCGTCCGGG CGGCATCGGC CTGGCCAGCA GTTGGCAAAA CATGA
 
Protein sequence
MFTWIIGSSL KFRFLVLAIA AMLLFFGTQQ LRKMPVDVFP EFAPPKVEIQ TEGPGMTATE 
VEELITIPME DQMRGVPGVQ YVRSSSVTGL SQVVLLFKMG SDLMDARQRV QERLKLAIAE
LPKSSGMPVI LQPLSSTSRV MKIGLSSKVH DQMDLSMIAY WTIKFRLMSV PGVASIPMWG
DQIKSLQVQV DPSLMRAHNV TLDEVMETTS DALDIGMLTY SSGGKARIDG MIDTPNQRLA
IHNESPVFSV EHLAQVPLSL KGRRPDPPRL GDVGKVVWDT WPLIGDAVIN DGHGLMMIVE
KLPWANTLEV TRGVEEALAA LKPGLPGVEI DSTIFRPATF IDLSMQNLTR ALIIGCLLVV
IVLGAFLYEW RVALISVIAI PLSLVTAGLV LYQMGATINT MVLAGFIVAL GDVVDDAIID
VENIVRRLRQ HRLAGSGKST ARIILEASLE VRSAIVHATV IVVLAVTPVF FMGGLSGVFF
EPLVLAYLVA MLASMVVALT VTPALSLLLL NRAGIEHRQS PLVPWLKRHY GAMLSRAIQA
PRATFAAALI LVVAAIGVWP FLGASLLPAF KERDFLMHWV PPEGTSHPET FRITQAASRE
LRAIPGVRNF GAHIGRAVGG DEPYGVNFTE NWISIDPKAD YDQTRASVEA AVAGYPGLYR
DVQTYLKERI KEVLTGAGES IVVRIFGPEL SVLRDRAHDV ETALKDIPGL IDLHLEQQVD
MPQVQVKVNL EKAARYGIKP GDVRRVVNVL MSGIEVTDIH RGGKVYDVFV WTAPSVRNNV
DDIREFLIDT PYGGRVRIAE VADVRIAATP NKIKRENNSR RIDVHANVKG RDLGAVANEV
EARLSKISFP MGYYPQLLGE YKERQSAQRN LLVASVFAVV AIFLILHATF RNFRLAGMIF
LALPAALVGA VLATFAADRV ISLGSLVGII TILGLSARNG IMLIEHCRYL QQEEGEPFGI
GLVLRGASER LSPILMTTLC TALALLPLIV PGSIPGHEIE HPMAVAILGG IITSSLLSLF
VVPILYLRHG GSSGEPSDAL PVRAASAWPA VGKT