Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2174 |
Symbol | |
ID | 4687647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2311521 |
End bp | 2312705 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639835184 |
Product | putative aminotransferase |
Protein accession | YP_982403 |
Protein GI | 121605074 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.796298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.154643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACC AGCCCATGAT TCCCGCCCGC ACACCGTTGC TCACGAGCAA GCTGCCGAAG GTCGGCACCA CGATTTTTAC CGTCATGTCG GCGCTGGCGG CCGAGAAAGG CGCGGTCAAC CTCGGCCAGG GCTTTCCTGA TTTCGACTGC GACCCGCAAC TCGTCAACGC CGTGACCAGC GCCATGCAGC GCGGCCTGAA CCAGTACCCG CCGATGGCCG GCGTGCCGGT GCTGCGCGAA GCGGTTGCCG CCAAGCTGGC CGCCCTCTAT GGCCGCAGCT ACGACGCCGG CAGCGAAATC ACCATCACGG CCGGCGCCAC GCAAGCCATC ATCACCATCA TTTTGGCCGT GGTGCATCCG GGCGATGAAG TCATCGTGCT GGAACCCTGC TACGACAGCT ATGTGCCCAA CATCGAGCTG GCCGGCGGCA CGGTGGTGCG CGTGCCTTTG ACGCCCGGCA CCTTCCGCCC CGATTTCGAC AAGATCAGCG CGGCGATCAG CCCCAAAACG CGCGCCATCA TCGTCAATTC GCCGCACAAC CCGAGCGCGA CAGTCTGGAG CCAAGCCGAC ATGCGCAGGC TGCAGGACAT CCTGGCGCCC ACCGACATCC TCCTGATCAG CGACGAGGTG TATGAGCACA TGGTGTTCGA TGCCGACCAG GGCCAGCTCC ACCAGAGCGC GGCGCGCTTT GCCGGACTGG CGGCGCGCGC CTTCATCGTC AGCAGCTTTG GCAAGACCTA CCATGTCACC GGCTGGAAGG TCGGCTATGT CGCCGCGCCT GCCGCGCTGA CGGCGGAGTT CCGCAAGGTC CACCAGTTCA ATGTGTTCAC CGTCAACACG CCGGTGCAGC ATGGGCTGGC CGCCTACATG GCCGATGACC GGCCTTACCT CGACCTGCCG GCTTTGTACC AGCGCAAGCG CGACCTGTTC CGCACCGGGC TGCAAAACAC CCGCTTCAGG CTGCTGCCCA GCGAAGGCAG CTATTTCCAG TGCGTGGACA TTTCAGCGGT CAGTGACCTG GGCGAGGCCG ATTTCTGCCA GTGGCTGACC ACCGAGATCG GCGTGGCGGC GATTCCGCTG TCGGCGTTCT ATGGCGACGG CTTCGACCAG CGGGTGGTGC GCTTTTGCTT TGCCAAGAAA GACCAAACCC TTCACCTGGC GCTGGAGCGG CTGGCCAAAC TGTAG
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Protein sequence | MPNQPMIPAR TPLLTSKLPK VGTTIFTVMS ALAAEKGAVN LGQGFPDFDC DPQLVNAVTS AMQRGLNQYP PMAGVPVLRE AVAAKLAALY GRSYDAGSEI TITAGATQAI ITIILAVVHP GDEVIVLEPC YDSYVPNIEL AGGTVVRVPL TPGTFRPDFD KISAAISPKT RAIIVNSPHN PSATVWSQAD MRRLQDILAP TDILLISDEV YEHMVFDADQ GQLHQSAARF AGLAARAFIV SSFGKTYHVT GWKVGYVAAP AALTAEFRKV HQFNVFTVNT PVQHGLAAYM ADDRPYLDLP ALYQRKRDLF RTGLQNTRFR LLPSEGSYFQ CVDISAVSDL GEADFCQWLT TEIGVAAIPL SAFYGDGFDQ RVVRFCFAKK DQTLHLALER LAKL
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