| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2166 |
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| Symbol | |
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| ID | 4687335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2304099 |
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| End bp | 2305229 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639835176 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_982395 |
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| Protein GI | 121605066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.179903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0643115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA AATTGAAATT GACAGTAGTG GCAACCCTTG CAATGGTGGC AGGCCTGGCT
TCAGCGCAGG ATGCTGTCGT GAAAATTGGT CATGTGGCAC CGATGTCCGG TGCGCAGGCC
CACTATGGCA AAGACAATGA AAATGGCGTG CGCATGGCCA TTGAAGAGCT GAACACTCAA
AACATCGTCA TCGGCGGCAA AAAAATCAAA TTTGAACTGG TGGCTGAAGA CGATGCCGCT
GATCCAAAAC AGGGCACGGC GGTTGCACAA AAACTGTGCG ACTCTAAAGT GGCCGGTGTG
GTGGGTCATC TGAACTCCGG CACCACTATT CCTGCTTCCA AGGTTTACAA CGACTGCGGC
ATCCCCATGG TGACAGGCGC TGCCACCAAC CCCAACCTGA CAAAGCCTGG CTACAAAACA
ACCTACCGCA TCATTGCCAA TGACAACGCC CTGGGCGCTG GCCTGGCCTT TTATGCCGCC
GATGCACTGA AACTGAAAAA AGTCGCGATC ATCGACGACC GTACCGCTTA CGGCCAGGGC
GTGGCCGAAG TGTTCAAAAA GACCGCCATG GCCAAGGGCA TGACGGTTGT CGATGAGCAG
TACACCACCG ACAAGGCGAC TGACTTCATG GCGATTCTGA CCGCCGTCAA ATCCAAAAGC
CCCGATGCGG TTTTCTTCGG CGGCATGGAT GCGCAAGGCG GTCCAATGCT GCGCCAGATG
GAGCAACTCG GCATGAGCAA CGTCAAGTTT TTTGGCGGTG ACGGCATCTG CACCGCTGAA
GTGGCCAAGC TGGCTGGCGG CGCCAAGACC ATTGGCAATG TGGTTTGCGC CGAAGGCGGA
GCATCGCTGT CCAAGATGCC AGGCGGCGAA GCCTGGAAAA AGCGTTACGA CGCCAAATAT
CCTGGCCAGT TCCAGATTTA CAGCCCCTAC ACCTATGACG CAACGTTTGT ACTCGTTGAC
GCCATGAAGC GCGCCAAATC CACCGATCCA AAGGTTTACA CGCCTGAGCT GATCAAAACA
AACTATAAGG GCGTGACCAC CACCATCGCA TTCGAGCCCA ACGGCGAATT GAAAAACCCT
GCCATCACCC TGTATGTGTA CAAGGACGGC AAAAAATCAG CGCTGAACTG A
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| Protein sequence | MQMKLKLTVV ATLAMVAGLA SAQDAVVKIG HVAPMSGAQA HYGKDNENGV RMAIEELNTQ
NIVIGGKKIK FELVAEDDAA DPKQGTAVAQ KLCDSKVAGV VGHLNSGTTI PASKVYNDCG
IPMVTGAATN PNLTKPGYKT TYRIIANDNA LGAGLAFYAA DALKLKKVAI IDDRTAYGQG
VAEVFKKTAM AKGMTVVDEQ YTTDKATDFM AILTAVKSKS PDAVFFGGMD AQGGPMLRQM
EQLGMSNVKF FGGDGICTAE VAKLAGGAKT IGNVVCAEGG ASLSKMPGGE AWKKRYDAKY
PGQFQIYSPY TYDATFVLVD AMKRAKSTDP KVYTPELIKT NYKGVTTTIA FEPNGELKNP
AITLYVYKDG KKSALN
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