Gene Pnap_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2162 
Symbol 
ID4687373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2299589 
End bp2300554 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content64% 
IMG OID639835172 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_982391 
Protein GI121605062 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.15406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAG ACACTATTCT TCTGGTGGGC CACGGCTCAC GCGAAAAATC GGGCAACGAC 
GAGATTGAAG CCTTTGCGCA GCAGTGGCGC GTGCGCCAGC CAGGCTGGCG CATCGAGGTT
TGCTTCATCG AGTTCTCCGA GATCACCATG AGCGAAGGCC TGCGCCGCGC CGCGACAGGC
GCGCAGCGGG TGCTGGTGGT GCCGTTGATC CTGAATGCCG CCGGCCACGT CAAGATGGAC
ATTCCGCAGG CCATTGACGG CGCGCGCCTG AAGTTTGCGC AGGTGCAGTT CCTGTACGCG
CCGCACCTCG CGGCCTGCGA CCCGATTCTG TCCATCGTCA AGCGCCGCCT GAAAGGCGCG
ATGCAGGCGC TGGACATGCC CGACCCGACG ACCACGGGCG TGGTGATGCT GGGGCGCGGC
TCGTCGGACC GGCAGGCCAA CGGCGAGATG GCCAAGATGG CGCGCTGGCT GATGGAGGAA
ACCGACCATG AACTGGTCGA TCTGGCGTTC ACCGGCATCA CCTGGCCGCG CCTTGAAAAA
GCCGTGCAGC GGCAAAGCCT GCTGGGCATG ACGCAGGTGG TGGTGCTGCC GTACTACCTG
TTCAACGGCA CGCTGGTCGA GCGCATCACG CGGCAGGTTG AAAACCTGAA AGCGCAGTAC
CCGGCCATCC GCTTTACCTC GACGGCGTAC TTCGGTTTTG AACGCGAAAT CTTTGAGCTG
CTGGAAGCGC GGGTGAATGA CCTGAAGCGC GGCGCGCCGG AGTTGCGCAT GCCGTGCGAC
GGCTGCAAGT ACCGCGAATT CGGCGTTGAA CATGGCCTGG GCGGGCATCA CCATGACGAT
GCCATTGCGC ACGACCACCA CCACGCTCAC GAACACCCGC ATCCGCATGC CCAGGCCATC
GTTCAGATTC ATCCGCATGA CCACGCGCAT CCGCACGACC ATCGCCACGA GCACGCCCAC
CCATGA
 
Protein sequence
MTADTILLVG HGSREKSGND EIEAFAQQWR VRQPGWRIEV CFIEFSEITM SEGLRRAATG 
AQRVLVVPLI LNAAGHVKMD IPQAIDGARL KFAQVQFLYA PHLAACDPIL SIVKRRLKGA
MQALDMPDPT TTGVVMLGRG SSDRQANGEM AKMARWLMEE TDHELVDLAF TGITWPRLEK
AVQRQSLLGM TQVVVLPYYL FNGTLVERIT RQVENLKAQY PAIRFTSTAY FGFEREIFEL
LEARVNDLKR GAPELRMPCD GCKYREFGVE HGLGGHHHDD AIAHDHHHAH EHPHPHAQAI
VQIHPHDHAH PHDHRHEHAH P