| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2142 |
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| Symbol | |
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| ID | 4688328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2282922 |
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| End bp | 2284085 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639835152 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_982371 |
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| Protein GI | 121605042 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00458594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCAAAA CCAGGACCGA CCAATACCAG GACATCCGCG ACGCGGTGCG CGCGCTGTGC
GCCGAGTTTC CCGATGAATA CCACCGCAAG ATCGACGAAG CCAGGGGCTA CCCGGAAGCC
TTTGTCGATG CGCTGACCCA GGCCGGCTGG CTGGCAGCCA TGATCCCGCA CGAGTACGGC
GGCTCGGGCC TGGGCCTGAC CGAGGCCTCG GTGGTGATGG AGGAAATCAA CCGCAGCGGC
GGCAATTCGG GCGCCTGCCA CGGCCAGATG TACAACATGG GAACGCTCTT GCGCCATGGC
TCCGAGGCGC AAAAGGAGCT GTACCTGCCA AAAATAGCCA CCGGCGAGTG GCGCCTGCAG
TCGATGGGCG TGACCGAGCC GAGCACCGGC ACCGACACCA CCAGGATCAA GACCACCGCC
GTGAAAAAGG ACGGCCGCTA CGTCATCAAC GGCCAGAAGG TCTGGATCTC GCGCGTGCAG
CATTCGGACT GGATGATTTT GCTGGCGCGC ACCACGCCGC TGGCCGAGGT GAAGAAAAAG
AGCGAAGGCA TGTCGATCTT CATGGTCGAT CTGCGCCAGG CCGAAAAGTC GGGCATGACG
GTGCGGCCGA TTCCCAACAT GGTCAACCAC GAGACCAACG AGCTGTTCTT CGAGAACCTC
GAAATCCCGG AGGAGAACCT GATCGGCGAG GAAGGCCAGG GCTTCAAGTA CATCCTGGAC
GGGTTGAACG CCGAACGCAC CTTGATCGCT GCCGAGTGCA TCGGCGACGG CTACTGGTTC
ATCGACCGCG TGACCAAGTA CGTCGGCGAG CGCGTGGTCT TCGGCCGGCC CATCGGCCAG
AACCAGGGCG TGCAGTTCCC GATTGCCGAG GCCTACATCG AGATCGAGGC CGCCAACCTG
ATGCGCTACC AGGCCTGCGA GCTGTTCGAT GCGCGCCAGC CCTGCGGCGC CCAGGCCAAC
ATGGCCAAGT ACCTGGCGGC CAAGGCGTCG TGGGAAGCAG CTAACGCCTG CATCCAGTTC
CACGGCGGCT TCGGCTTTGC CAACGAATAC GACGTGGAGC GCAAGTTCCG CGAGACGCGC
CTGTACCAGG TCGCGCCGAT CTCGACCAAT TTGATCCTGA GCTACGTGGC CGAGCATGAG
CTGGGCCTGC CGCGCTCATT CTGA
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| Protein sequence | MIKTRTDQYQ DIRDAVRALC AEFPDEYHRK IDEARGYPEA FVDALTQAGW LAAMIPHEYG
GSGLGLTEAS VVMEEINRSG GNSGACHGQM YNMGTLLRHG SEAQKELYLP KIATGEWRLQ
SMGVTEPSTG TDTTRIKTTA VKKDGRYVIN GQKVWISRVQ HSDWMILLAR TTPLAEVKKK
SEGMSIFMVD LRQAEKSGMT VRPIPNMVNH ETNELFFENL EIPEENLIGE EGQGFKYILD
GLNAERTLIA AECIGDGYWF IDRVTKYVGE RVVFGRPIGQ NQGVQFPIAE AYIEIEAANL
MRYQACELFD ARQPCGAQAN MAKYLAAKAS WEAANACIQF HGGFGFANEY DVERKFRETR
LYQVAPISTN LILSYVAEHE LGLPRSF
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