| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_2133 |
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| Symbol | |
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| ID | 4687893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 2271368 |
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| End bp | 2273371 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639835144 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_982363 |
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| Protein GI | 121605034 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.569736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00936242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAAGAAA ACACCCCGCC CGAAGGCCAT GGCCAAGTTT TGTGGACGCC CGATCCGGAA
CAGCTGCAGT CCAGCCGGCT TGTGAAATAC CAGCAATGGC TCTCCACCGA AAAGGGCGTG
CACACCCAGG ATTACGATGA ACTGTGGCGC TGGTCAATCG AGGACTTGCC AGGCTTTTGG
CAGTCCATCT GGGACTTCTT TGAAGTTCAA GCGGATGGAG AGCGGGAGCC TGCGATGGTT
GGCGAGCAGA TGCCCGGTAT CCAGTGGTTC CCGAACGCAC GCCTGAACTT TGCGGAGCAC
GTTTTCCGCA ATGCCACCTC CGCGCACCCG GTGATGCTCG CCCACACGGA AGGCGCCCCG
CTTCGGGAAA TATCCTGGGA AGAGCTGGAG CGCACGACTG CGGCGCTGGC GGCACAGCTG
CGCAGTTGGG GCGTGCAACC CGGTGACCGC GTGGCCAGCT TCATGCCCAA TCTCCCGGAA
ACCGTGATCG CCTTCCTGGC CTGCGCCAGT GTCGGCGCCA TCTGGTCCAG CTGCGCACCC
GACATGGGGG CAAACGTGGT GCTGGACCGC CTGCGCCAGA TCGAGCCCAA GGTGCTTTTC
GCGACCGACA GCTACAGCTA CAACGGCAAG AATCACGACC GGTCTGTGGT GGTGAACGAA
CTGCTGGCAG GGCTGCCCAG CGTGCAGCGG GTGGTGCAGG TTTCGGGGCC GCTGGACGGA
AGTCGTCCCT TGCCGTGGCG CAATCATTGC TCTTGGCAAG ATTGTGTAGC GGGGAGCGCA
ACACCGCGCT ACGAACGGCT GCCTTTCAGC CACCCCTTGT GGATTCTGTA TTCCTCCGGA
ACGACCGGGC TGCCCAAGGC CATCGTGCAC AGCCACGGTG GCATTGTGCT GACGCACCTG
AAATCGATGG CGCTGCAAAA CGATCTGCGG CCGGGTGATC GGTTGATGTT TCTGGGTAGC
ACCGGGTGGG CTGTGTGGAA CCTTCAGGTG GGCGCCCTGC TGTCGGGCGC ATCCATTGTT
CTCTACGACG GCAACCCTGC CTGGCCAACG GGCGATGCGC TGTGGCGCTT CATGGATGAA
CATGGTGTGA CGCAGTTGGG CTGCGGAGCG GCTTACCTCA TCAATTGCAT GAAGGATGGC
GTGCGCCCCC GGGACTTCGC AAAGTTGTCC AAACTCCGCA CCATCCTCTC CACCGGTTCG
CCGCTGTCGA TGGATGCCTA CCACTGGGTT TACGACGCGG TCAAACCTGA TGTATGGCTG
GCCTCCATCA GTGGCGGGAC GGATATTGCC GCGTGCTTCG TGGCCTGCGC CCCTACTTTG
CCGGTGCACG CCGGCGAGAT TCAATGCCGG GAACTTGGCG TGGCCGCCTA CGCCTGGAAC
GACGCTGGCG AGCCGGTGGT CAACGAGGTG GGCGAGTTGG TCATCACCCA ACCCATGCCG
TCGATGCCCC TTTATTTCTG GAACGACACG GGCAACAAGC GCTACCTGGA GAGCTATTTT
GAAACCTATC CTGGCCTGTG GCGCCAGGGT GACTGGATAC GCTTCACAGA GCACGGCAGC
GCAGTCATCT ATGGGCGATC AGACAGCACG ATCAACCGCT TTGGCATCCG GATGGGAACG
GCTGAAATCT ACCGGGTGGT TGAAGAAATG CCCGAGGTGC GCGACAGCCT GGTCATCGAC
CTGGAGTTTT TGGGGCGCCC CTCGTTCATG CCGCTGTTTG TGGTGCTGCA ACCCGGCGCG
GTTTTCGACG AGGTACTGCA GGAACGCATC AAGCACCAGA TACGCTCCAA GGCCTCTGCG
CGCCACGTCC CCAACGAGGT GGTGCAGGTG ACTGAAATTC CTCGCACGCT GAGCGGAAAA
AAGATGGAAG TGCCTGTCCG GAAACTGCTG TTGGGTAGCT CGCCTGACAA GGCGGCCAGC
CCGGATTCAA TGCAGAACCC GACCAGCCTG GATTTTTTTG TCCAGTATGC GAAGGCCCTC
AAGGTGAAGG AGATTTCAAC ATGA
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| Protein sequence | MQENTPPEGH GQVLWTPDPE QLQSSRLVKY QQWLSTEKGV HTQDYDELWR WSIEDLPGFW
QSIWDFFEVQ ADGEREPAMV GEQMPGIQWF PNARLNFAEH VFRNATSAHP VMLAHTEGAP
LREISWEELE RTTAALAAQL RSWGVQPGDR VASFMPNLPE TVIAFLACAS VGAIWSSCAP
DMGANVVLDR LRQIEPKVLF ATDSYSYNGK NHDRSVVVNE LLAGLPSVQR VVQVSGPLDG
SRPLPWRNHC SWQDCVAGSA TPRYERLPFS HPLWILYSSG TTGLPKAIVH SHGGIVLTHL
KSMALQNDLR PGDRLMFLGS TGWAVWNLQV GALLSGASIV LYDGNPAWPT GDALWRFMDE
HGVTQLGCGA AYLINCMKDG VRPRDFAKLS KLRTILSTGS PLSMDAYHWV YDAVKPDVWL
ASISGGTDIA ACFVACAPTL PVHAGEIQCR ELGVAAYAWN DAGEPVVNEV GELVITQPMP
SMPLYFWNDT GNKRYLESYF ETYPGLWRQG DWIRFTEHGS AVIYGRSDST INRFGIRMGT
AEIYRVVEEM PEVRDSLVID LEFLGRPSFM PLFVVLQPGA VFDEVLQERI KHQIRSKASA
RHVPNEVVQV TEIPRTLSGK KMEVPVRKLL LGSSPDKAAS PDSMQNPTSL DFFVQYAKAL
KVKEIST
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