Gene Pnap_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2096 
Symbol 
ID4688979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2234605 
End bp2236053 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content64% 
IMG OID639835107 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_982326 
Protein GI121604997 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.546579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.617878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC CCAGAAAAAT TATTCCCATC GCCATGGCCG GCAGCGGCGC AGCCGCCGCC 
TCGCTATTCG CCTATGAGGC ACCGAACAAG ATTTATGCGC GCGCGGTCAG CGGCTGGTTC
GCCGCCTGGC GCTGGGCGCT GGTCTGGATC ACGCAGCTTG TGTTCTACGG CTTGCCGTGG
CTGCAATGGA ATGGCCGCCA GGCGGTGCTG TTCGACCTGG AGGGCCAGCG CTTTTTCCTG
TTCGGCCTGG CCCTGTATCC GCAGGATCTG ATCTACCTGG CCGCGCTGCT GATCGTGTCG
GCGCTGGCGC TGTTCTTCTT CACCGCCGTG GCCGGGCGGC TGTGGTGCGG CTTTGCCTGC
CCGCAAACGG TGTACACCGA AATCTTCATG TGGGTCGAGC GCAAGACCGA AGGCGACCGC
ATCGCTCGGA TGCGGCTGGA CGCGGCGCCC TGGTCAGCGC AAAAGCTGGC GCGCAAGGCC
GCCAAGCAAA CCCTGTGGCT GGCCATCAGC CTGTGGACGG GCTTTACGTT TGTTGGCTAC
TTCACGCCCA TCCTTACGCT GGCCGCGTCA GCGGCCGTCT GGAGCGCCGG CCCCTGGGAG
GTGTTCTGGG TGCTGTTCTA CGGCACGTTC ACCTACGGCA ACGCGGGCTA CCTGCGCGAG
CAGGTCTGCA AGCACATGTG TCCTTACGCA CGGTTCCAGG GCGCGATGTT CGACCGCGAC
ACGCTCATCA TCGGCTACGA CAAGGCGCGC GGCGAATCGC GCGGCTCGCG CCCGCGAACT
GCCGATGCCA AGGCGCTGGG ACTGGGCGAC TGCATCGATT GCACCTTGTG CGTGCAGGTC
TGCCCGACCG GCATCGACAT CCGCGACGGC CTGCAGAGCA ACTGCATCGG CTGCGCAGCC
TGCATCGATG TGTGCGACTC GGTCATGGAC AAGATGAACT ACCCGCGCGG CTTGATTCGC
TATTCAACGG AAAACGCCCT GGCCAATGGC TGGAGCCGCT CGGAACTGCT CCGACGCATC
GTGCGCCCCC GGGTGCTGGT CTATGGCGCC ATCTTGCTGC TGGTCTCGGT CACGGTGGTC
ACCAGCATGT CCCTGCGCAG CCCGTTCCGG GTGAATGTCA TCCGTGACCG CGGCGTCATG
GCCCGCACGG TCGGCAACGG CGTGGCCGAG AATGTCTATC GCTTGCAGGT CATGAACGCC
ACCGAAACGG CGCAGCGTTA CCGGATTGAT GTCCAGGGGC CGCACGGCCT GGCCCTGGCG
CAAGCCGCTG GACTCGAACT CATGCCCATC GAAGAGCGCT ACGTTCCTGT GACCGTGAAG
TTGCCAGGCG CAGCCGCTGC ATCCCTGGCC GGTCAGAAGT TGCCCATCCA TTTTGCGGTC
ACACAACTGG CGGAAAACGG CCAGGAAGTT CGGGTTATGG AGGACAGCAC GTTTTGGGTG
CCGCGATGA
 
Protein sequence
MSKPRKIIPI AMAGSGAAAA SLFAYEAPNK IYARAVSGWF AAWRWALVWI TQLVFYGLPW 
LQWNGRQAVL FDLEGQRFFL FGLALYPQDL IYLAALLIVS ALALFFFTAV AGRLWCGFAC
PQTVYTEIFM WVERKTEGDR IARMRLDAAP WSAQKLARKA AKQTLWLAIS LWTGFTFVGY
FTPILTLAAS AAVWSAGPWE VFWVLFYGTF TYGNAGYLRE QVCKHMCPYA RFQGAMFDRD
TLIIGYDKAR GESRGSRPRT ADAKALGLGD CIDCTLCVQV CPTGIDIRDG LQSNCIGCAA
CIDVCDSVMD KMNYPRGLIR YSTENALANG WSRSELLRRI VRPRVLVYGA ILLLVSVTVV
TSMSLRSPFR VNVIRDRGVM ARTVGNGVAE NVYRLQVMNA TETAQRYRID VQGPHGLALA
QAAGLELMPI EERYVPVTVK LPGAAAASLA GQKLPIHFAV TQLAENGQEV RVMEDSTFWV
PR