Gene Pnap_2075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2075 
Symbol 
ID4689951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2203710 
End bp2204477 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID639835086 
ProductGntR domain-containing protein 
Protein accessionYP_982305 
Protein GI121604976 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCTG ACCAAATAGT GCTCAATCTA CAACTCACTT TCTTGAAAAT GCGCCGCATG 
ATGGAAACAA CGGAAAACAT GGAACCCCTT CGGCAGGTCG AAACACGTCG CCTGTACCAG
CAGATTGCAG ACCGGGTGCG CACGCTGATC CAGCGGGGCA ACTATCCGGC GGGCAGTCGC
CTGCCGCCCG AGCGGGATCT GGCCCAGCAA TTGGGCGTGT CGCGCCCTTC GCTGCGCGAG
GCGCTGATTG CTCTGGAAAT CGAAGGCAGC GTCGAAATCC GCATGGGCTC GGGCGTCTAT
GTCTGCAGCC GCGCCCTGCG CCGGCCCGGC CTGGCCGTGG CCATGGGCGA AAGTCCGGCC
GAACTGATGC AGGCGCGCAG CGCGGTCGAA GGCGCTGTCG CGTCCCTGGC TTGCGCCAAC
GTCACGCCAG AAGGTCTGGC ACGGGTTCAG GCGGCCGTCG AGGCCATGCG GGAAGACATT
GCAATGGGCC GCGACGTCTT GGAGCACGAC CGGCAGTTCC ATGTCTGCAT CGCCGAGATG
AGCGGCAACT CGGTACTGGC GAGCCTGGTC GGCACCCTGT TCGATGAGCG GCAAAGCCCG
CTGGCCTCCC ACATGCGAAA CCGGCTCGAA GGCCAGCAAA CATGGCACGC CGCGCTGAGC
GAACACGAAC AGATCCTGCG CTGCCTGGCG CAACGCGATC CCCTGGCGGC CGAATCGGCG
ATGCGCTCCC ATATACGGGC AGCGGCGGAC CGCTGGGTGA TTCCTTGA
 
Protein sequence
MWPDQIVLNL QLTFLKMRRM METTENMEPL RQVETRRLYQ QIADRVRTLI QRGNYPAGSR 
LPPERDLAQQ LGVSRPSLRE ALIALEIEGS VEIRMGSGVY VCSRALRRPG LAVAMGESPA
ELMQARSAVE GAVASLACAN VTPEGLARVQ AAVEAMREDI AMGRDVLEHD RQFHVCIAEM
SGNSVLASLV GTLFDERQSP LASHMRNRLE GQQTWHAALS EHEQILRCLA QRDPLAAESA
MRSHIRAAAD RWVIP