Gene Pnap_2067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2067 
Symbol 
ID4689770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2195789 
End bp2196763 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID639835078 
Productribokinase-like domain-containing protein 
Protein accessionYP_982297 
Protein GI121604968 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0314864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACC CACTTTTCGA CGTCCTCACG GTGGGCGAGC CCATGGCGCT TTTCGCCGCC 
GTGCAGCCGG GCGACCTGTC CGGCGTCAAC GACTACCACC GCGTCACGGC GGGCGCCGAA
CTCAATGTCG CCACCGGGCT GGCGCGCCTT GGTATGCGCG TGGCTTACGT CAGCCGGGTC
GGCCGTGACT CCTTCGGGCG TTTTTTGCTG GACGAGATGG CCCGCGAGGG CATCGACTGC
CGCCATGTGG CCATCGACGA TGCGCACCCG ACGGGTTTCA TGATGAAGAC CCGCAGCGAG
GACGGGAGCG ATCCGCAGGT CGAGTATTTC CGGCGCGGCT CTGCGGCCAG CCACCTGGGG
CTGGCGGATT TGCCGGGCCT GGACGCGCAA GGGCGTTTCC CGGCCCGCCA TCTGCACCTG
ACCGGCATCA CGCCAGCCTT GTCTGAAACG ACGCGCGAAC TGGTCTTCAC CCTGGCCAGG
CAGGCGCGCC AGGCCGGCGC CTCCATTTCC TTTGACCCCA ATTTGCGCCC GCGCTTGTGG
CCTTCGCCGC AAGCCATGGC CGATTGCCTG AACGCGCTGG CCGCAGAAAC CGCCGGCACC
GTGCTGCCCG GCCTGGCAGA GGGCCGCTTG CTCACGGGAC GCGACAGCGC CGAGGGCATC
GCCGACTTCT ACCTTGCCCT GGGGGCGCGG CAGGTGGTCG TCAAGCTGGG GCCGCAGGGC
GCTTACTTCG CCGACCGCGA GGGCCGCTGC GGTACGGTTG CCGCCATGCC GGTGGCCCGC
GTGGTCGATA CCGTGGGTGC CGGGGATGGT TTTGCCGTGG GGGTGGTCAG CGCTTTGCTT
GAAGGGCGGC CGCTGGCCGA TGCCGTGGCC CGTGGCAATG CCATCGGCGC GCGCGTGGTC
CAGTTTCCGG GCGATTCCGA TGGCCTGCCC ACGCATCGGC AGCTGTCCGC TTTTATCGGC
GACGGCGGGC TGTGA
 
Protein sequence
MSNPLFDVLT VGEPMALFAA VQPGDLSGVN DYHRVTAGAE LNVATGLARL GMRVAYVSRV 
GRDSFGRFLL DEMAREGIDC RHVAIDDAHP TGFMMKTRSE DGSDPQVEYF RRGSAASHLG
LADLPGLDAQ GRFPARHLHL TGITPALSET TRELVFTLAR QARQAGASIS FDPNLRPRLW
PSPQAMADCL NALAAETAGT VLPGLAEGRL LTGRDSAEGI ADFYLALGAR QVVVKLGPQG
AYFADREGRC GTVAAMPVAR VVDTVGAGDG FAVGVVSALL EGRPLADAVA RGNAIGARVV
QFPGDSDGLP THRQLSAFIG DGGL