Gene Pnap_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2059 
Symbol 
ID4689665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2185082 
End bp2185444 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID639835070 
Producttranslation initiation factor SUI1 
Protein accessionYP_982289 
Protein GI121604960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CTCTTTCCAA CACCGGCCTG GTCTATTCGA CCGATGCCGG AAGAATGTGC 
CCCGGCTGCC GCCAGCCTGC ATCGGCCTGC ATCTGCAAGC TGGCCAAAGC GCTGCCCAAA
TCCGATGGCG TGGCGCGTGT CTCCCGAAGC ACCAAGGGCC GGGGCGGCAA AACCGTCACG
CTGGTCACCG GGCTGGCGCT GGACGAGCTA GCGCTGGTTC AGCTCGGCAA GCAGCTCAAG
GCGGCCTGCG GTTCGGGCGG AACGGTCAAG GACGGCGTCA TCGAAGTGCA GGGCGACCAC
TGCGAGCAGG TGTTGCTGGC GCTGGGCAAA CAGGGATTTG TTGCCAAGCG GGCAGGGGGC
TGA
 
Protein sequence
MKKALSNTGL VYSTDAGRMC PGCRQPASAC ICKLAKALPK SDGVARVSRS TKGRGGKTVT 
LVTGLALDEL ALVQLGKQLK AACGSGGTVK DGVIEVQGDH CEQVLLALGK QGFVAKRAGG