Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_2057 |
Symbol | |
ID | 4689994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 2184019 |
End bp | 2184750 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639835068 |
Product | ABC transporter related |
Protein accession | YP_982287 |
Protein GI | 121604958 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAGG TGATTCACGT TAAAGGCCTG ACCAAGCTGT TTGGCAGGCA TGCGGTGCTG CGCGGCATTG ACTGCGCCAT CAAGGCCACC GAAGTGGTGT GCGTGATCGG GCCGTCAGGC TCGGGCAAGA GCACTTTCCT TCGCTGCCTG AATGGACTGG AAGATGCATC AGGCGGCGAG GTGCTGGTGC ATGGCGTGTC GGTGCATGAA CCGAAAACCG ATGTCGATGC GCTGCGCTCG GAAATCGGCA TGGTGTTCCA GCGCTTCAAC CTGTTCCCGC ACAAGACCGT GCTTGAAAAC ATCATGCTGG CGCCGTGCAA GGTGCGCGGC CTGACCACGG CCCAGGCCCG GCTGCGCGCC AGCGAATTGC TGGAAAAAGT CGGGCTGCTG GAGAAGATCG ACGCCTACCC CAATCAGTTG TCAGGCGGGC AGCAGCAGCG CGTGGCGATT GCGCGGGCGC TGGCGATGCA GCCGCGCATC ATGCTGTTTG ACGAACCCAC TTCCGCGCTG GACCCTGAAA TGGTCGGCGA GGTGCTGGCC GTCATGCAGG CGCTGGCCGA GGAAGGCATG ACCATGGTGG TCGTGACGCA CGAGATGGGC TTTGCCCGCC AGGTGGCCGA CCGGGTGCTG TTCATCGACG AAGGCGTGGT GGTGGAAGAA GGAACGCCGG CCGCGATTTT TGACAACCCG CAGGAAGACC GGACACGCCG TTTCCTGAGC AAGGTTCTGT AG
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Protein sequence | MEEVIHVKGL TKLFGRHAVL RGIDCAIKAT EVVCVIGPSG SGKSTFLRCL NGLEDASGGE VLVHGVSVHE PKTDVDALRS EIGMVFQRFN LFPHKTVLEN IMLAPCKVRG LTTAQARLRA SELLEKVGLL EKIDAYPNQL SGGQQQRVAI ARALAMQPRI MLFDEPTSAL DPEMVGEVLA VMQALAEEGM TMVVVTHEMG FARQVADRVL FIDEGVVVEE GTPAAIFDNP QEDRTRRFLS KVL
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