Gene Pnap_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1983 
Symbol 
ID4688105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2105150 
End bp2106034 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content64% 
IMG OID639834991 
Productphosphoribulokinase 
Protein accessionYP_982213 
Protein GI121604884 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.784052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC GCAACCCCAT CATCGCGATC ACCGGCTCGT CCGGCGCGGG CACCACGTCG 
GTGACCCGCA CGTTTGAAAA CATCTTCCGC CGCGAAGGCG TGAACGCCGC CATCATCGAG
GGCGACAGCT TTCACCGCCA CGACCGCGTG GCCATGAAGC GCAAGGCGCT GGAGGCCGAG
CAGGCGGGCG ACAAGAACTT CAGCCACTTC GGCCCCGAGA ACAACCTGTT CGAGGAGCTG
GAAACGCTGT TTGCCGACTA CGCCGAAAGC GGCACCGGCA AGCGCCGCAA GTACCTGCAC
GACCCCGAGG AGGCCGCGCC CTACGGCCAG GAGCCGGGCA CCTTCACGCC GTGGGAAAAC
GTGCCCGACG GCACCGACCT GCTGTTCTAT GAAGGCCTGC ACGGCGCCGT GGTCACGCCC
GAGATCAACA TCGCCCGGCA CCCCGATCTG CTCATCGGCG TGGTGCCGGT CATCAACCTG
GAGTGGATCC AGAAACTCTG GCGCGACAAG TCCAAGCGCG GCTACAGCAC CGAGGCGGTG
ACCGACACCA TCCTGCGCCG CATGCCCGAC TACGTGAATT ACATTTGCCC GCAGTTCATG
CACACGCATG TCAACTTCCA GCGCGTGCCG ATGGTCGATA CCTCCAACCC CTTCATCGCG
CGCGACATTC CCTCGGCCGA CGAAAGCATG GTGGTGATCC GCTTTGCCAA GCCCAAGGGC
ATCGACTTCC AGTATTTGCT GAACATGATC GACGCCAGCT TCATGAGCCG GGCCAACACC
ATCGTCGTGC CCGGCGGCAA GATGGAACTC GCCATGCAGC TGATCTTCAC GCCCTTTGTC
TGGCGAATGA TGGAGCGCCG CAAGCGGGCG CTGGGCACGA ACTGA
 
Protein sequence
MSERNPIIAI TGSSGAGTTS VTRTFENIFR REGVNAAIIE GDSFHRHDRV AMKRKALEAE 
QAGDKNFSHF GPENNLFEEL ETLFADYAES GTGKRRKYLH DPEEAAPYGQ EPGTFTPWEN
VPDGTDLLFY EGLHGAVVTP EINIARHPDL LIGVVPVINL EWIQKLWRDK SKRGYSTEAV
TDTILRRMPD YVNYICPQFM HTHVNFQRVP MVDTSNPFIA RDIPSADESM VVIRFAKPKG
IDFQYLLNMI DASFMSRANT IVVPGGKMEL AMQLIFTPFV WRMMERRKRA LGTN