| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1982 |
|---|
| Symbol | |
|---|
| ID | 4688089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2103968 |
|---|
| End bp | 2105062 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639834990 |
|---|
| Product | inositol phosphatase/fructose-1,6-bisphosphatase |
|---|
| Protein accession | YP_982212 |
|---|
| Protein GI | 121604883 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0158] Fructose-1,6-bisphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.489922 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGA ACAAACGCTT CACGCTCACG CAGTACCTGA TCCAGGAGCG GCGCCGCTTT
CCGGATGCCC GGGGCGACTT CAACGCCCTG ATCCTCGACG TCGCCCTGGC CTGCAAGGCC
ATCGCCCGCG CCGTGGCTTT CGGCGAACTC GGCGGCATGC TGGGCAACCA CGATGCGGAT
GCGGGCGGCT CCATCAATGT GCAGGGCGAA ACCCAGAAAA AGCTCGATGT CATCAGCAAC
CAGTATTTCA CCCGCATGAA CGAGTGGGGC GGCCACCTGG CCGGCATGGC GTCGGAAGAA
ATGGATGACG CCTACCAGAT TCCGGCCGAG CATCCACGCG GCAAGTACCT GCTGGTGTTC
GACCCGCTCG ACGGCTCCAG CAACATCGAC GTGAACGTGT CGGTGGGCAG CATCTTTTCC
ATCCTGCGCG CGCCGCAGGA GGCGGTGGAG AGCGGCCGCG ACGTGGTCGA GGCCGATTTC
TTCCAGCCCG GCGCCGAACA GGTCGCCGCC GGCTACGCGC TCTACGGCCC GACCACCATG
CTGGTGCTGA GCGTGGGCAA CGGCGTGGCC GGCTTCACGC TCGACCCGAT GCTGGGCGAG
TTCATGCTCA CGCACGACAA GCTGCAGGTG CCCGAGAACA CGCAGGAATT CGCCATCAAC
GCCTCAAACA GCCGCTTCTG GGAGCCGCCC GTCAAGCGCT ACGTGGACGA ATGCCTGGCC
GGCAAGACCG GGCCGCGCGA CAAGGACTTC AACATGCGCT GGATCGCCAG CATGGTGGCC
GAGGCGCACC GCATCCTGAT GCGCGGCGGC GTGTTTTTGT ACCCGCGCGA CAGCAAGGAC
GCGGCCAAGC CCGGGCGGCT GCGCCTGCTC TACGAGGCCA ACCCCATCGG CTTCATCATG
GAGCAGGCGG GCGGGCGGGC CAGCACCGGC CGCGAGCCGA TGCTTGGCGT TCAGCCCACG
TCGCTGCACC AGCGCATCGG CCTGATTTTC GGCTCGAAAA ACGAGGTCGA GCGCATCGAG
CGCTACCACG CCGAACCGGC CAGGGCCGAA ATGCACAACC CGCTGTTTGC CGAGCGCAGC
CTGTTCCGCA GCTGA
|
|---|
| Protein sequence | MPLNKRFTLT QYLIQERRRF PDARGDFNAL ILDVALACKA IARAVAFGEL GGMLGNHDAD
AGGSINVQGE TQKKLDVISN QYFTRMNEWG GHLAGMASEE MDDAYQIPAE HPRGKYLLVF
DPLDGSSNID VNVSVGSIFS ILRAPQEAVE SGRDVVEADF FQPGAEQVAA GYALYGPTTM
LVLSVGNGVA GFTLDPMLGE FMLTHDKLQV PENTQEFAIN ASNSRFWEPP VKRYVDECLA
GKTGPRDKDF NMRWIASMVA EAHRILMRGG VFLYPRDSKD AAKPGRLRLL YEANPIGFIM
EQAGGRASTG REPMLGVQPT SLHQRIGLIF GSKNEVERIE RYHAEPARAE MHNPLFAERS
LFRS
|
|---|
| |