| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1907 |
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| Symbol | |
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| ID | 4689049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 2029847 |
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| End bp | 2031034 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834914 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_982138 |
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| Protein GI | 121604809 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.780883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACTC GTCGTCTGGT CCTCACCCGC AGTGCTGCCG TGATGGGCAC GGCTTGCTCC
GGCTTGCTGC TGCCCGAACT CGTGCGCGCC CAGTCGGGCA AGGTCCGGGT GGGCTTCATG
CTTCCCTATA CGGGCACCTT CAGCCAGCTT GGCGTGGCGA TTGAAAACGG CTTTCGCATG
GCCATCAATG AACAGGGCGG CAAGCTGGGC GGACGCGAGA TCGAATACTT CAAGGTCGAT
GACGAGTCGG AGCCCTCCAA GGGCATTGAA AACGCCAGCA AGCTGGTGCA GCGCGACAAG
GTCGATGTGC TGGTCGGCAC CGTGCATTCG GGCGTGCAGA TGGGTATCCA GAAAGTTGCC
CGCGACAGCG GCGTGCTGTG CCTGATTCCC AATGCAGGCG TGCATGCCGC AACGCGCGCC
CTGTGCGCGC CGAATGTGTT CCGCACGTCC TTCAGCAATT CGCAGCCGAC CCGGGCGCTG
GGCCAGGCCA TGGTCGCCAG GGGCCACAAG AAAGCGGTCT GGATCACCTG GAAATACGCG
GCTGGCGACG AAGCCTTCGA AGGCTTCAAG GAAAGCTATA CCGCAGCGGG CGGCACCATC
GTCAAGGAAC TGGGACTGCC CTTCCCCAAT GTTGAGTTCC AGGCGCTGCT GACCGAAATC
GCCGCACTCA AGCCCGATGC GGTGGCCTGT TTCTTTGCCG GCGGTGGCGC GGCCAAGTTC
ATCCGCGACT ATGCCGCCGC AGGCCTGAAA GGCAAGATTC CCCTGTACGG ATCGGGCTTC
CTGACCGAAG GCGTGCTCGA CGCCGCCGGC CCTGCGGCAG AAGGCATCGT CACCACCATG
CACTACAGCG ACTCGCTCGA CACGCCGCGC AACAAAAAAT TCCGTCTTGA TTACGTGAAG
GCGTTTCGCA GCCAGCCCGA CGTGTACGCC GTGCAGGGTT ACGACACCGG CCTGTTGCTC
ATCCAGGGGG CGAATGCCGT CAAGGGCGAC CTTGGCGCGA AGCCGGCCCT GTACAAGGCC
ATGGAAGGCG CCACCATCGA CAGCCCGCGC GGAAAGTGGA CCATGAGCAA GGCGCATAAC
CCGGTGCAGG ACATCTACCT GCGCGTGGTT GAAAACAAGG AAAACAAGGT GATTGGCATT
GCCGCCAAAG CGCTTTCCGA CTCGGGCCTT GGCTGCAAGA TGGCTTGA
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| Protein sequence | MPTRRLVLTR SAAVMGTACS GLLLPELVRA QSGKVRVGFM LPYTGTFSQL GVAIENGFRM
AINEQGGKLG GREIEYFKVD DESEPSKGIE NASKLVQRDK VDVLVGTVHS GVQMGIQKVA
RDSGVLCLIP NAGVHAATRA LCAPNVFRTS FSNSQPTRAL GQAMVARGHK KAVWITWKYA
AGDEAFEGFK ESYTAAGGTI VKELGLPFPN VEFQALLTEI AALKPDAVAC FFAGGGAAKF
IRDYAAAGLK GKIPLYGSGF LTEGVLDAAG PAAEGIVTTM HYSDSLDTPR NKKFRLDYVK
AFRSQPDVYA VQGYDTGLLL IQGANAVKGD LGAKPALYKA MEGATIDSPR GKWTMSKAHN
PVQDIYLRVV ENKENKVIGI AAKALSDSGL GCKMA
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