Gene Pnap_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1883 
Symbol 
ID4687303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2007118 
End bp2008458 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content65% 
IMG OID639834890 
Productadenylosuccinate synthetase 
Protein accessionYP_982114 
Protein GI121604785 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.513447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.607065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACA AACCAAGCGC AGCCACCGGC CGCAATGTCG TGGTCGTGGG CACCCAGTGG 
GGCGACGAAG GCAAGGGCAA GCTGGTCGAT TGGCTGACCG AAATGTCGCA GGGCGTGGTG
CGCTTCCAGG GCGGTCACAA CGCCGGCCAC ACGCTGGTCA TCAACGGCGT GAAGACCGCC
TTGCACCTGA TTCCGAGCGG CATCATGCGC CCGGGCGTGA AGTGCTACAT CGGCAACGGC
GTGGTGCTGT CGGCGGCCAA GCTGTTCGAG GAAATCGAAG GGCTGGAAAA AGCCGGTGTG
GAAGTGCGCT CGCGCCTGCG CATCAGCGAA GCCTGCCCGC TGATCCTGCC TTTCCACGCG
GCCATCGACA TTGCCCGCGA AACCTTCCGC GAAAAGGGCG GCACCGAGAA GATCGGCACC
ACCGGCCGCG GCATCGGCCC GGCCTACGAA GACAAGATCG CCCGGCGCGC CCTGCGCGTG
CAGGATCTGA AATACCCCGA GCGCTTTGCC GCCAAGCTGC GCGAGTTGCT GGAACTGCAC
AACTTCGTGC TGACCGGCTT CCTGAATGCG CCGGCTGTTG ACTTTGACAC GGTGTACAAC
GAAGCCATGC TGCACGCCGA ACTGCTCAAG CCGATGATGG CCGATGTCTC GCGCGAACTC
AATGACGCGC ACCAGGCCGG CGCCAACCTG CTGTTCGAGG GCGCGCAGGG CACACTGCTC
GACGTGGACC ACGGCACCTA CCCGTATGTG ACCTCCAGCA ACTGCGTGGC CGGCAATGCG
GCGGCGGGCG CCGGCGTGGG TCCGGGCATG CTGCACTACA TCCTGGGCAT CACCAAGGCC
TATTGCACGC GCGTGGGCGG CGGGCCGTTC CCGACCGAAC TCGACTGGGA AAATCCCGGC
ACGGTCGGCT ACCACCTCAG CTCCGTTGGC GCCGAAAAAG GCGTCACCAC CGGGCGCAGC
CGTCGTTGCG GCTGGTTCGA TGCGGCCCTG CTCAAGCGCT CGGCGCAGGT CAACGGCCTG
TCGGGCCTGT GCATCACCAA GCTCGACGTG CTGGACGGCA TCGAAGAACT CAAGCTGTGC
ACCGGCTATG AGCTTGACGG CCAGACCACC GACATTTTGC CGATGGGCGC CGATGACATT
GCCCGCTGCG TGCCGATTTA CGAAACCATG CCGGGCTGGA GCCAGACCAC CGTCGGCGTC
ACCGAGTACG ACAAGCTGCC GGCCGCCGCC CAGCGCTACC TGCAGCGGAT CGAGGAGGTG
ACTGGCGTGC CGGTCCACAT GATCTCGACC AGCCCCGACC GGGACCACAC CATCCTGCTG
CGTAACCCCT ACGCGGCCTG A
 
Protein sequence
MTNKPSAATG RNVVVVGTQW GDEGKGKLVD WLTEMSQGVV RFQGGHNAGH TLVINGVKTA 
LHLIPSGIMR PGVKCYIGNG VVLSAAKLFE EIEGLEKAGV EVRSRLRISE ACPLILPFHA
AIDIARETFR EKGGTEKIGT TGRGIGPAYE DKIARRALRV QDLKYPERFA AKLRELLELH
NFVLTGFLNA PAVDFDTVYN EAMLHAELLK PMMADVSREL NDAHQAGANL LFEGAQGTLL
DVDHGTYPYV TSSNCVAGNA AAGAGVGPGM LHYILGITKA YCTRVGGGPF PTELDWENPG
TVGYHLSSVG AEKGVTTGRS RRCGWFDAAL LKRSAQVNGL SGLCITKLDV LDGIEELKLC
TGYELDGQTT DILPMGADDI ARCVPIYETM PGWSQTTVGV TEYDKLPAAA QRYLQRIEEV
TGVPVHMIST SPDRDHTILL RNPYAA