| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1878 |
|---|
| Symbol | |
|---|
| ID | 4686476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 2001963 |
|---|
| End bp | 2003114 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639834885 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_982109 |
|---|
| Protein GI | 121604780 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.932644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACAC AAGCACTCGC CCTTCTGGTG GGGGTCGATC TGGGCCTTCC CAACTTTGAT
ACAAATCTGC AGGAACTCGG TTTGCTGGCG CAAACCGCGG GCTTGGAGCC TGTGGCGCGC
ATCACCTGCA AACGCAAGGC TCCGGATGCG GCATTGTTTA TTGGCTCGGG CAAGGCTGAT
GAAATCAAGA TGCTGGCGCT CGATACGGGC GCCACTGAGG TTTTGTTCGA CCAGTCACTC
AGCCCGGCCC AGCAGCGCAA TCTTGAACGG CATCTTGAAA TGCCGGTCAA CGACCGGACG
CTGCTGATCC TGGAGATTTT TGCCCAGCGC GCCCGCAGCC ATGAAGGCAA GCTTCAGGTC
GAACTGGCGC GCTTGCAGTA TGTGTCAACA CGACTGGTTC GGCGCTGGTC CCACCTGGAG
CGGCAAACAG GTGGCGCCGG TGTTCGCGGC GGTCCGGGCG AAAAGCAGAT CGAGCTTGAC
AAGCGCATGA TTGGCGATGC CATCAAGCGC ACCAAGGAAC GCCTGACCAA AGTCAAAAAA
CAGCGCCAAA CGCAGCGAAA GCAGCGCGAG CGGCGCAACG CACTCTCGAT TTCTCTCGTC
GGTTACACCA ACGCCGGAAA ATCAACCCTG TTCAATGCCC TGGTCAAGGC CAGTGCCTAT
ACGGCGGACC AGCTTTTTGC AACGCTGGAC ACCACCACAC GCCAGCTTTA TCTCGGCGAG
GCGGGTCGCT CTGCATCGCT GTCGGATACA GTCGGCTTTA TTCGCGATCT GCCGCATGGG
CTGATTGATG CTTTTGCTGC AACCTTGAAG GAAGCCGTTG ATGCCGACTT GCTGCTGCAT
GTGGTTGATG GCTCCAATCC TGACTATCTG GAGCAGATTG AGCAGGTGCA ACGCGTGCTG
TCCGAGATCG GTGCCGCCGA TGTGCCGCAA ATACTGGTGT TCAACAAGCT CGATGCCATT
GAAAATGGCA GCTTGCCCCT GCATCTGAAA GACCGGTTTG AACTCAGGGA TGCTTTTGAA
GGATCCAGCC GCAGTGTCGA ACGCGTGTTT GTGAGTGCTA AAACAGGCGA AGGCCTGAAT
TTGCTTCGCG AGTTGCTGGC GGCTCAGGCT GTGAGCGTAC AGGCCAGCGA TATTCCCCAA
GCACCCCAAT GA
|
|---|
| Protein sequence | MKTQALALLV GVDLGLPNFD TNLQELGLLA QTAGLEPVAR ITCKRKAPDA ALFIGSGKAD
EIKMLALDTG ATEVLFDQSL SPAQQRNLER HLEMPVNDRT LLILEIFAQR ARSHEGKLQV
ELARLQYVST RLVRRWSHLE RQTGGAGVRG GPGEKQIELD KRMIGDAIKR TKERLTKVKK
QRQTQRKQRE RRNALSISLV GYTNAGKSTL FNALVKASAY TADQLFATLD TTTRQLYLGE
AGRSASLSDT VGFIRDLPHG LIDAFAATLK EAVDADLLLH VVDGSNPDYL EQIEQVQRVL
SEIGAADVPQ ILVFNKLDAI ENGSLPLHLK DRFELRDAFE GSSRSVERVF VSAKTGEGLN
LLRELLAAQA VSVQASDIPQ APQ
|
|---|
| |