| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1865 |
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| Symbol | |
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| ID | 4686319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1988744 |
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| End bp | 1989778 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834872 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_982096 |
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| Protein GI | 121604767 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT CAGAATTGAG CAAATTTATT ATATCGGGCC GTGTTGATGC CAATTCGCTG
GCAGACGATT CGCAGGATGA GGCAGAAACC ACTGCGGAAG TGGAATTGCG GCATGTCAGC
GTTCCCGTTG AAAGCCATGG CTGTCGCCTC GACAAGGCCC TGGCTGGTCT GGTGCCCGAG
TTCTCACGCA GTTACCTTCA GCAATTGATC GAGGACGGGG GCGTGCTGGT CAAGGGCCTT
AAAGCCATCA AGACCTCTGC AAAGGTCAAG GCTGGCGATG AACTGACCAT CGAGTTGCGG
CCCACGCCTC AAAGCCAAGC CTTCAAACCT GAGGAGATGG CGCTGGACAT TGTTTATGAA
GACCGCCACC TGATAGTCGT CAACAAGCCT GCAGGGCTGG TGGTGCATCC AGCGCCCGGC
AACTGGAGCG GCACGCTGCT CAACGGCTTG CTGGCGCATG ACCCGCAGGC GTCTTTCATG
CCGCGTGCCG GCATCGTGCA TCGCCTTGAC AAGGACACCA GCGGCCTGAT GGTCGTGGCG
CGCCAGCGAC AGACGATGGA TCAGCTTGTC AGCATGATTG CGGCCCGTAC CGTCAGCCGC
GAATACATCG CATTGGCCCA TGGTACGTGG GAGGGCGCCA AAACCCGCCA GGTCGAAGCG
CCGATTGGCC GAGATCCCCG CAACAGGCTG CGCATGGCGG TGGTTGACCT GGAGAAAAAT
TCAGGCAAAG CTGCTTCTAC GGTAATTTCG CTGCTCGACA ATGCCGAAAA GCATTGCCTG
GTCAAATGCA AGCTGCACAC AGGTCGCACC CACCAGATTC GGGTTCATAT GGCATTTCTG
GGTCACCCGC TGGTCTCGGA CGAGGTCTAT GGCGGTGCCG TTGCGGGTAG CTTGCAGCGC
CAGGCACTGC ATGCCTGCCG TCTGGCGTTC GCGCATCCGG TGACGGGTGC CGCGATGGAA
TTCAAGTCGC TGCCGCCGCC TGATTTGGAG ATGGCTATTG CCGGTTTTGG CCTGAGATAC
AATCAGGCCC TGTAG
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| Protein sequence | MTDSELSKFI ISGRVDANSL ADDSQDEAET TAEVELRHVS VPVESHGCRL DKALAGLVPE
FSRSYLQQLI EDGGVLVKGL KAIKTSAKVK AGDELTIELR PTPQSQAFKP EEMALDIVYE
DRHLIVVNKP AGLVVHPAPG NWSGTLLNGL LAHDPQASFM PRAGIVHRLD KDTSGLMVVA
RQRQTMDQLV SMIAARTVSR EYIALAHGTW EGAKTRQVEA PIGRDPRNRL RMAVVDLEKN
SGKAASTVIS LLDNAEKHCL VKCKLHTGRT HQIRVHMAFL GHPLVSDEVY GGAVAGSLQR
QALHACRLAF AHPVTGAAME FKSLPPPDLE MAIAGFGLRY NQAL
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