| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1863 |
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| Symbol | |
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| ID | 4686469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1985933 |
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| End bp | 1987939 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639834870 |
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| Product | helicase c2 |
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| Protein accession | YP_982094 |
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| Protein GI | 121604765 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.879395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTG CGTTTGAAGT TGACGAGGCT TTTTCTCCCG GAGGTATCCT TTCGCGGGCG
ACCGAACACT TTGTTCCACG CAGCGGCCAG AAAGAGATGG CACTGGCGGT GACACATGCC
ATTGAAGACA GGCGTTCTCT GGTCGTGGAA GCCAGTACTG GCGTGGGTAA AACCTTTTCC
TATCTGGTTC CAGCCCTGTT GAGCGGCGAG CGCATCCTGC TGTCAACTGC AACCAAGGCA
TTGCAAGACC AGCTTTTCGG TCGTGATTTG CCTCGCCTGG TTGAAGCGCT TGAGTTGCCG
GTGCGAACGG CCCTGCTCAA AGGCCGTGGC AGCTATTTAT GCCTGCATCG CATGGAAATG
GCGCGACAGG AAACTTGTCT GCCAGAGGGC GTATCAGTAC GTTCGCTGGC AAGAGTGGAG
CAATGGTCAC AGGTGACAAG AACAGGTGAT CTTGCAGAAC TTCCTGGCCT TGATGAGCGT
TCGCCCATGA TTCCCCTGGT GACCTCGACA AGGGACAATT GCCTGGGCTT GCAATGTCCG
CGGTTTCGAG CTTGCCATGT CAACCTGGCC CGTCGAGAGG CGATGGCCGC CGATGTCGTT
GTCATAAATC ATCATCTTTT TTTTGCCGAC TTGGCCGTTC GCGAATCCGG CGTGGCCGAG
TTGCTGCCTT CGGTGCGGAT TGCCATTTTT GATGAAGCAC ATCAATTGAA CGAAACCGGC
GTGCAGTTTC TAGGCAGCAA CCTGACGACC GGCCAGTTGC TGGATTTTTC CCGGGACATG
CTGGCAGCCG GGCTGCAACT GGCCCGTGGG TTGGTTGACT GGCAGGAAAT CGTTGTTGCC
ATAGAAAGAG CTGCGCGTGA ATTGCGTCTT TGCGCTGGCA AGCACTATCC TGGAACCAGG
CTGCGCTGGA CTGGTGAGAT TCCAGAAGGC CTGCCTGCCA ATGATTGGCA ACATGCCCTG
GAGGCTGTCC ATGCATCTTG TCTGCAGGCT TGCGCAGCGC TCGACACGGT CAGCGAAATT
GCACCAGATT TTGTCCGGCT CCATGAGCGC GCAGCTCAAC TGGCAGAGCG AGTGGAGACC
TTCGTCAATG TCTGCGAACC CGGCTTTGTA CGTTGGCTCG ACGTGGGAAT GCAGTTGCGT
CTGGTTGAGT CGCCGCTGGA TATTTCAAGG GCGGTAAAAA GCAAAATGCT GGGTGTGTCA
GGTGAGAGCG AAAAAACCTG GATTTTCACG TCAGCCACGC TGGGTGATGA TGAAAAACTC
AGCTGGTTTA CCCAGCCTTG TGGTCTTGAA GACGCTGATG TGCTGCGGGT TGGAAGTCCT
TTCGATTATG AACGCCAGGC CGCGCTGTAT GTGCCGCCCA GCTTTCCCAA GCCGGGAGAC
CCGCTCCATA GCACAAAGGT AGCCGAATGC GCGGCAGTCT GGTCGCGTCA GCTGGGCGGA
CGGACCATGG TGCTGACAAC CACCTTGCGT GCATTGCGGG CGATTGGAGA AGCACTGCAG
GCGGCTTTTG ATCAGTCAGG AGACTTGCAG GTTCTGGTGC AGGGCGGCAT GCCCAAACGC
GCCCTGATTG AACGTTTTCG CGAAGGCGAT TCGCTGGGTG GAAAAGGCTG CGTCCTGGTT
GCGTCGGCAT CGTTTTGGGA GGGTATTGAC GTTCCGGGCG ATGCGCTGCA ACTGGTTATT
ATTGACAAAC TGCCTTTTCC TCCACCCAAC GACCCTCTGG CTGAAGCCAG GGCAAAGCTG
CTGGAATCGC AAGGACGCAG TCCCTTTACC AATTATTTCC TGCCAGAAGC CGCAGTAGCA
CTTAGACAGG GTGCCGGCCG TCTGATCCGC AGGGAAACCG ATCAAGGCGT TCTGGTGGTC
TGTGACAGTC GCCTGGTTTC CATGGGTTAT GGAAGGCGGC TTATCAAGGC ATTGCCGCCC
ATGCAAAGAC TCGAATCGGA GCAGGCCTTG ATGGCCAGAC TGGGTAGTCT TACCAGAACT
TGTACCACGG ATTGTCCGCA GTCCTGA
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| Protein sequence | MNLAFEVDEA FSPGGILSRA TEHFVPRSGQ KEMALAVTHA IEDRRSLVVE ASTGVGKTFS
YLVPALLSGE RILLSTATKA LQDQLFGRDL PRLVEALELP VRTALLKGRG SYLCLHRMEM
ARQETCLPEG VSVRSLARVE QWSQVTRTGD LAELPGLDER SPMIPLVTST RDNCLGLQCP
RFRACHVNLA RREAMAADVV VINHHLFFAD LAVRESGVAE LLPSVRIAIF DEAHQLNETG
VQFLGSNLTT GQLLDFSRDM LAAGLQLARG LVDWQEIVVA IERAARELRL CAGKHYPGTR
LRWTGEIPEG LPANDWQHAL EAVHASCLQA CAALDTVSEI APDFVRLHER AAQLAERVET
FVNVCEPGFV RWLDVGMQLR LVESPLDISR AVKSKMLGVS GESEKTWIFT SATLGDDEKL
SWFTQPCGLE DADVLRVGSP FDYERQAALY VPPSFPKPGD PLHSTKVAEC AAVWSRQLGG
RTMVLTTTLR ALRAIGEALQ AAFDQSGDLQ VLVQGGMPKR ALIERFREGD SLGGKGCVLV
ASASFWEGID VPGDALQLVI IDKLPFPPPN DPLAEARAKL LESQGRSPFT NYFLPEAAVA
LRQGAGRLIR RETDQGVLVV CDSRLVSMGY GRRLIKALPP MQRLESEQAL MARLGSLTRT
CTTDCPQS
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