Gene Pnap_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1836 
Symbol 
ID4687747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1955463 
End bp1956956 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content64% 
IMG OID639834842 
Producthypothetical protein 
Protein accessionYP_982067 
Protein GI121604738 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.421405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTG CCTTCGACAC CCCAACAAGC GCCAACCCCC ATCCTGCCGC GCCTGACCTG 
AAATGGGTCA ACAGCTTTGC CGGACTGGGT GCGGATTTCT ACACCGAACT GGCGCCCAGC
CCCCTGCCGT CGCCGTACTG GGTCGGGCGC AACCGCGCGC TGGCGCGCGA ACTGGGGCTG
CACGACCAAT GGCTGGAGTC GGCCGAGACG CTGGCCGCCC TGACCGGCAA CCAGCCGCTT
GCAGGCTCGC GCCCGCTGGC CAGCGTCTAT GCCGGACACC AGTTCGGCGT CTGGGCCGGG
CAACTGGGCG ACGGCCGGGC GATCCTGCTC GGGGAACTCG AAACGCCCAG GGGTCCGCAG
GAAATCCAGC TCAAGGGCGC GGGCAAGACG CCCTACTCCC GCATGGGCGA TGGCCGGGCC
GTGCTGCGCA GTTCGATCCG GGAATTTTTG TGCTCCGAAG CCATGCACGG CCTGGGCATT
GCAACCACGC GCGCGCTGTG CGTGACCGGC TCCGACGCAG CGGTGCGGCG CGAGGAAATA
GAAACGGCGG CCGTCGTGAC CCGCACGGCG CCGAGCTTTA TCCGCTTCGG CCATTTCGAG
CATTTCAGCT ACCGCAACAA GCCGGCGCAG CTCAAGGCGC TGGCCGATTA CGTCATAGCC
CGCTTTTATC CCGACTGCCG TGAGGCCAGG CAGCCGTATG CGGCGCTGCT CCAGGCGGTC
AGCGAACGCA CCGCGCACAT GATGGCGGCC TGGCAGGCGG TCGGCTTTTG CCATGGCGTG
ATGAACACCG ACAACATGAG CATCCTGGGG CTGACGATTG ACTACGGCCC GTTCCAGTTC
CTCGATGCGT TCGATCCCGG CCACATCTGC AACCACTCGG ACGACCACGG CCGCTATGCC
TACAACAAGC AGCCCAACAT GGCGTACTGG AACCTGTTCT GCCTCGGCCA GGCCTTGCTG
CCCTTGATCG AGAACCAGGA AGACGCGCTG GCCGCGCTGG AGTCGTACAA AACCGTGTTC
CCGCAGGCGC TGCAGGCCCG GATGCGCGCC AAGCTGGGGC TGCCCGATGA GCATGAAAGC
GACGGCCAGC TGATCGAAAG CACCTTCCGG CTGCTGGCCA GCAACAAGGT CGATTACACG
ATTTTCTGGC GCCGGCTGTG CGGCTTTACC GCGCAAAGCG GCCACGAGCC GGTGCGCGAC
CTGTTTTTCG ACCTGGAATC CTTCAACGCC TGGGCGCTAC AATATTCAGA GCGGCTTGCG
CCCGTGGATA TTGCGCAAAA GGCCGATTTG ATGCTTAAAA GCAATCCAAA ATACGTGCTG
CGCAACCACC TGGGCGAAGA AGCCATCCAG GCGGCGAAAC TAAAAGACTT TTCGCAGGTC
GATACCCTGC TGACGCTGCT GCAGGCACCC TTTGACGAGC ATCCCGGACA AGACAGCTTT
GCCGGCTTCC CGCCCGACTG GGCATCATCG ATTGCCATCA GTTGCAGCTC GTAA
 
Protein sequence
MSTAFDTPTS ANPHPAAPDL KWVNSFAGLG ADFYTELAPS PLPSPYWVGR NRALARELGL 
HDQWLESAET LAALTGNQPL AGSRPLASVY AGHQFGVWAG QLGDGRAILL GELETPRGPQ
EIQLKGAGKT PYSRMGDGRA VLRSSIREFL CSEAMHGLGI ATTRALCVTG SDAAVRREEI
ETAAVVTRTA PSFIRFGHFE HFSYRNKPAQ LKALADYVIA RFYPDCREAR QPYAALLQAV
SERTAHMMAA WQAVGFCHGV MNTDNMSILG LTIDYGPFQF LDAFDPGHIC NHSDDHGRYA
YNKQPNMAYW NLFCLGQALL PLIENQEDAL AALESYKTVF PQALQARMRA KLGLPDEHES
DGQLIESTFR LLASNKVDYT IFWRRLCGFT AQSGHEPVRD LFFDLESFNA WALQYSERLA
PVDIAQKADL MLKSNPKYVL RNHLGEEAIQ AAKLKDFSQV DTLLTLLQAP FDEHPGQDSF
AGFPPDWASS IAISCSS