Gene Pnap_1835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1835 
Symbol 
ID4688512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1955019 
End bp1955429 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content58% 
IMG OID639834841 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_982066 
Protein GI121604737 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.462521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA AGATCCAGAA AACCGATGCC GAATGGAAAG CCCTGCTGAC TGAAAAAGGC 
GCGGAACCCG TGGCCTTCAA CGTCACCCGC CACGCCGCCA CCGAGCGTCC GTTCACCGGC
AAATACGAGG ACAACTATGC TGAAGGCACT TACCGTTGCA TCTGTTGCGA TGCCGAGCTG
TTCGACTCGT CCACCAAATT CGACGCCGGC TGCGGCTGGC CGAGTTTTTC ACAGGAAGTG
AAGGAAGGCG CGATTGAAGA GCATGTGGAC AAGGCCCACG GCATGACGCG CACCGAAACC
GTTTGCGCGA ATTGCGGCGC CCATCTGGGC CATGTTTTTC CCGATGGACC CACGCCAACG
GGGCTGCGTT ATTGCATGAA TTCTGCTTCT CTCGATTTCA AGCCACGCTG A
 
Protein sequence
MSAKIQKTDA EWKALLTEKG AEPVAFNVTR HAATERPFTG KYEDNYAEGT YRCICCDAEL 
FDSSTKFDAG CGWPSFSQEV KEGAIEEHVD KAHGMTRTET VCANCGAHLG HVFPDGPTPT
GLRYCMNSAS LDFKPR