Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1808 |
Symbol | |
ID | 4690065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1919309 |
End bp | 1921327 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834814 |
Product | ABC transporter related |
Protein accession | YP_982039 |
Protein GI | 121604710 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.762366 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCC TTAAAAATGT GGTGCTGCGT CGCGGCGCCA AAGTGATTCT CGACAGCGCG TCTGTCACCC TCAATCCGGG CGAAAAAATC GGCCTGGTGG GCCGCAACGG CGCGGGCAAG TCCTCGCTGT TCGCCATGCT CAACGGCACG CTGCACGAGG ACGGCGGCGA ATACTACATT CCCGCGCAGT GGAAAATGGC GCAGGTCGCG CAGGACATGC CCGAAACCGA ACAAAGCGCC ACCAGCTACG TGATCGAAGG CGACACCGTG CTGCTGGCCG CGCAGGCCGA GGTCGATGCG TCCGAGCTGA GCGGTGACGG CGACCGCATG GCGCACGCCT ACATGGATTT GTACGACTGC GGCGCGCACG ACGCGCAGGC GCGCGCGCAG GCCCTGATCC TGGGCCTGGG TTTCAAGCTC AGCGAGCTCG ACAACCCGGT CAACAGCTTT TCGGGCGGCT GGCGCATGCG CCTGCAACTG GCGCGCGCGC TGATGTGCCC GTCGGATTTG CTGCTGCTTG ACGAGCCGAC CAACCATCTG GACTTGGATG CACTGGTCTG GCTCGAAGCC TGGCTCAAGC GCTACCAGGG AACGATGCTG GTCATCAGCC ATGACCGCGA GTTCCTCGAC GCCGTGACCG ACGTGACCGT GCATATCGAA AGCGCCAAGC TCACGCGCTA CGGCGGCAAC TACAGCAAAT TTGAAGACCT GCGCGCCGAG CAGATGGCGC TGCAGCAAGG CGCGTTCAAC AAGCAGCAGG ACAAGATTGC CCACCTGCAA AAGTTCATCG CCCGCTTCAA GGCCAAGGCC AGCAAGGCCA AGCAGGCGCA AAGCCGCGTC AAGGCGCTGG ACCGTATGGA AAAAATCGCG CCGCTGCTGG CCGAAGCCGA CTTCACCTTC GAGTTCAAGG AGCCGGCGAA CCTGCCCAAC CCGATGCTGT CGATGCAGAA CGCCTACTTC GGCTACCCCG CGCCCGAAGA CGCGCCCGAA GGCACACCGC CCACGGTCAT CGTGCAGAAC GTCAGCAAGT CGGTGCTGGC CGGCCAGCGC ATCGGCATTC TGGGCGCCAA CGGCCAGGGC AAATCGACCG TGGTCAAAAC CATCGCGCGC GCCCTCGCTC CGATTGAAGG CGAGATGACC GAGGGCAAGG GCCTGAACAT CGGCTACTTT GCCCAGCAGG AACTCGACGT GCTGCGCCCG GCGGACAACC CGCTCGAGCA CATGATCCGC CTGGTCAAGG AAGTGACCGC CGCCGGCAAG ATGGGCAGCC AGCCCACGCG CGAGCAGGAC TTGCGCAGCT TCCTGGGCAA TTTCAACTTC GGCGGCGACA TGGTCAAGCA GGCCGTCGGC AGCATGAGCG GCGGCGAAAA AGCGAGATTG GTGCTGTGCA TGATCGTCTG GCAGCGCCCC AACCTCTTGC TGCTCGATGA GCCGACCAAC CACCTGGACT TGGCCACGCG CGAGGCGCTG TCGATGGCGC TCAATGAATT CGAAGGCACC GTGATGCTGG TCAGCCACGA CCGCGCCTTG CTGCGCGCCG TTTGCGACGA GTTCTGGATG GTCTCGCGCG GTGGCGTCGC CCCGTTCGAC GGCGACCTGG ACGACTACCA GCGCTACCTG CTCGACGAGG CCAAGCGCCA GCGCGAGGAA GCCAAGAAAG CCAGCAACAG CCCCGCTGCG CCCGCTGCTA CCAAAACAGT AGCTGTCAGT GCAGACACAG CAAGCGCAAA AGGCCAATCC GACGTAAAAA ACTCGGCCAG CAAGAAGGAA GACGCCCAGC GCCGCCAGCA ACAGTCGGAC GCAGCCAAGC CGCTGCGCAA GGAACTCGAA AAAATCGACC GCCAGCTGCA GAGCATGAAC AGCGAAAAGG CCAACCTTGA AGTCTTGCTG ACGACGGCCA AGGCGCCAGC GGAAATCGCC CAGACCGGCA AACGCCTCAA GACGATTGAA GCCGACCTGG CCAAGCTCGA AGAACGCTGG CTGGAAGTGA CGGAAAAGCT GGAAGCCGTC GCCGCATAA
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Protein sequence | MITLKNVVLR RGAKVILDSA SVTLNPGEKI GLVGRNGAGK SSLFAMLNGT LHEDGGEYYI PAQWKMAQVA QDMPETEQSA TSYVIEGDTV LLAAQAEVDA SELSGDGDRM AHAYMDLYDC GAHDAQARAQ ALILGLGFKL SELDNPVNSF SGGWRMRLQL ARALMCPSDL LLLDEPTNHL DLDALVWLEA WLKRYQGTML VISHDREFLD AVTDVTVHIE SAKLTRYGGN YSKFEDLRAE QMALQQGAFN KQQDKIAHLQ KFIARFKAKA SKAKQAQSRV KALDRMEKIA PLLAEADFTF EFKEPANLPN PMLSMQNAYF GYPAPEDAPE GTPPTVIVQN VSKSVLAGQR IGILGANGQG KSTVVKTIAR ALAPIEGEMT EGKGLNIGYF AQQELDVLRP ADNPLEHMIR LVKEVTAAGK MGSQPTREQD LRSFLGNFNF GGDMVKQAVG SMSGGEKARL VLCMIVWQRP NLLLLDEPTN HLDLATREAL SMALNEFEGT VMLVSHDRAL LRAVCDEFWM VSRGGVAPFD GDLDDYQRYL LDEAKRQREE AKKASNSPAA PAATKTVAVS ADTASAKGQS DVKNSASKKE DAQRRQQQSD AAKPLRKELE KIDRQLQSMN SEKANLEVLL TTAKAPAEIA QTGKRLKTIE ADLAKLEERW LEVTEKLEAV AA
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