| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1803 |
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| Symbol | |
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| ID | 4686254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1913691 |
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| End bp | 1915421 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834809 |
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| Product | ABC transporter |
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| Protein accession | YP_982034 |
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| Protein GI | 121604705 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.550427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG CAGAACAACC CGGATTCAAC GCCCGCCTGT GGCGACGCTT CGCCACGATT
GCGCGGCCTT ACTGGTTCTC GGATGAGCGC TGGCGTGCCC GTGGCATGCT GGTGCTGCTG
GTCTTTCTGC TGCTGGGGCA GACCGCCTTC AACGTGCTGT TCAACCAGGA AACCGGCGAA
TTCACCTCGG CCCTGGCGGC GCGCGATGCC GACCGTTTCT GGGCCTCGAT CTGGCGCTAC
ACGGCGATTC TCGTGGCGGC TGTGCCGATT TACGCGCTGT ATTACTACGT GCGCGACACG
CTCGGGCTGC GCTGGCGGCG CTGGCTGACG GACCGTTTTT TGGCGCGCTA TTTTCATCAG
CGCGCCTATT ACCGGCTCGG CACGGAGGCC GGCATCGACA ACCCCGACCA GCGCATTTCC
GAAGACATCA ACTCCTTCAC CCAGCAGTCG CTGTATTTCT CGATGATCGT GCTGGGCTCG
GTGCTCCAAC TGGTCGCCTT TTCGGCCGTG CTGTGGTCGA TCTCGCAGGG TCTGGTTTTT
TTCCTGATCG GCTATGCGGT GTTCAGCACC GTCTTCACGG GCGCGGTGTT CGGCAAGCGG
CTGATCGGGC TGAACTTTCG CCAGCTGCAG CGCGAGGCCG ACTTTCGCTT CAGCCTGGTG
CGGGTGCGCG AGCATGCCGA GCCGATTGCC TTTCACGATG GCGAGGCGCG CGAAATGTCG
GCGCTGCAAC GCATCTTCGC GCTGGCCTAC GCCAACTACC AGCAGGTGCT GCGCTGGCAG
TTCGGGCTCA ACCTGTTCCA GTACGCGCAT GCGTTCCTGA CCATCGTTCT GCCCACGGTG
ATCATTGCCG GTGATGTGCT GTCGGGGCGC CTGGAGGTCG GCCGGGCGAT ACAGGCCGCG
GGCGCCTTTG CCGCCATCCT GAGCGCGCTC ACGGTAATCG TCGAACATTT CGAAGGCCTG
AGCCGCTTTT CAGCCGGCGT CGAGCGGCTG CATGCCTTTT CGCAAGCCCT GGATGCCGAA
GCCGGCACGC CCGGCGGCGC TGCCGATGAT GCCTTCCAGA AAATTCATAC GCTGCATGGT
TTTGAGTTAA GCCTTGAACG GCTGACGATA CTCACGCCCG GGCGGGAGCA TCTGCTGCTT
CAAGAGGTCA CGCTAGCCGT CAACCCCGGC CAGGGGCTGC TGATCGTCGG ACCCAGCGGC
ACAGGCAAGA GTTCGCTGCT GCGGGTGATT GCCGGGCTGT GGACCACCGG CTCGGGCGAG
GTGACACGGC CGGCCGGATC GGACATGCTG TTCATGCCCC AGCAGCCCTA CCTGCCGCTG
GGCGACCTGC GCTGCCAGCT GACCTACCCG CACACCGAGC GCGACATCTC GGACGAAGAG
CTGCTGCAGT GGCTGGCGCA GGTAAACCTG CCGGCGCTGG CCGAGCGCTT CGGCGGCCTG
GGTGCCGAGC TGGACTGGCA GCGCGTGCTG TCAGTCGGCG AGCAGCAGCG GCTGGCCTTC
GCCCGGGCCC TGCTCGCCAA GCCGCGCTAC CTGCTGCTTG ACGAGGCCAC CAGCGCGCTC
GATGCGGCCA ATGAGGAGCT TTTGTACGGC CAGTTGGCCG GCCTGTCGAT CACCCCGGTC
AGCATCAGCC ACCACGCGGC GGTCCTGAAA CACCACGCCT GGGTGCTGGA GCTGCCCGGG
GATGGCAGCT GGACGCTGCA TGCGGCGAAG AGCTACCGCT GGGGATCCTG A
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| Protein sequence | MSAAEQPGFN ARLWRRFATI ARPYWFSDER WRARGMLVLL VFLLLGQTAF NVLFNQETGE
FTSALAARDA DRFWASIWRY TAILVAAVPI YALYYYVRDT LGLRWRRWLT DRFLARYFHQ
RAYYRLGTEA GIDNPDQRIS EDINSFTQQS LYFSMIVLGS VLQLVAFSAV LWSISQGLVF
FLIGYAVFST VFTGAVFGKR LIGLNFRQLQ READFRFSLV RVREHAEPIA FHDGEAREMS
ALQRIFALAY ANYQQVLRWQ FGLNLFQYAH AFLTIVLPTV IIAGDVLSGR LEVGRAIQAA
GAFAAILSAL TVIVEHFEGL SRFSAGVERL HAFSQALDAE AGTPGGAADD AFQKIHTLHG
FELSLERLTI LTPGREHLLL QEVTLAVNPG QGLLIVGPSG TGKSSLLRVI AGLWTTGSGE
VTRPAGSDML FMPQQPYLPL GDLRCQLTYP HTERDISDEE LLQWLAQVNL PALAERFGGL
GAELDWQRVL SVGEQQRLAF ARALLAKPRY LLLDEATSAL DAANEELLYG QLAGLSITPV
SISHHAAVLK HHAWVLELPG DGSWTLHAAK SYRWGS
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