| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1719 |
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| Symbol | |
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| ID | 4686931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1822336 |
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| End bp | 1823352 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834723 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_981953 |
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| Protein GI | 121604624 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00792328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTT TTTACGACAA GGATTGTGAT TTGAGCCTGA TCAAGGGCAA GACCGTGGCC
ATCATCGGCT ATGGCAGCCA AGGCCATGCA CACGCCCAGA ATTTGAATGA CAGCGGCGTC
AAGGTTGTCG TAGGCCTTCG CAAAGGCGGC GCTTCGTGGC CCAAGGTTGA AAAAGCCGGC
CTGCAGGTGG CTGAAGTGGC TGATGCCGTC AAGGCCGCTG ATGTGGTCAT GATCCTGTTG
CCTGATGAGC AAATCGGCGC GGTTTACAAG AACGACGTGG CCCCCAACAT CAAGCAGGGC
GCTTCCCTGG TGTTTGCCCA CGGCTTCAAT GTGCATTACG GCGCCGTGAT TCCGCGCGAC
GACCTCGATG TCTGGATGGT CGCTCCCAAG GCCCCGGGCC ACACGGTACG CAACACCTAT
ACCCAGGGCG GCGGCGTACC GCACCTGGTT GCAGTGCATC AGGACAAGTC CGGCAAAGCC
CGTGACCTGG CCCTGAGCTA CGCGATGGCC AATGGCGGCG GCAAGGCCGG CATCATTGAA
ACCAACTTCC GCGAAGAAAC CGAAACCGAT CTGTTCGGTG AACAGGCCGT ACTGTGCGGC
GGTGCGGTCG AACTCATCAA GGCTGGCTTC GAGACGCTGG TGGAAGCCGG CTATGCGCCA
GAAATGGCCT ACTTCGAGTG CCTGCACGAA CTCAAGCTGA TCGTGGACCT GATCTACGAA
GGCGGCATTG CCAACATGAA CTACTCCATC TCGAACAATG CCGAGTATGG TGAGTACGTG
ACCGGCCCGC GCATCGTGAC CGAAGACACG AAGAACGCCA TGCGCGCCGT GCTCAAGGAC
ATCCAGACCG GCGAATACGC CAAGAGTTTC CTGTTGGAGA ACATCGCTGG CGCGCCTACC
CTGATCAGCC GCCGCCGTTT GAATGCCGAG CACCAGATCG AACAAGTGGG CGGAAAGCTC
CGCGCCATGA TGCCGTGGAT TGCCAAGAAC AAGCTGGTTG ACCAGACGCG CAACTGA
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| Protein sequence | MKVFYDKDCD LSLIKGKTVA IIGYGSQGHA HAQNLNDSGV KVVVGLRKGG ASWPKVEKAG
LQVAEVADAV KAADVVMILL PDEQIGAVYK NDVAPNIKQG ASLVFAHGFN VHYGAVIPRD
DLDVWMVAPK APGHTVRNTY TQGGGVPHLV AVHQDKSGKA RDLALSYAMA NGGGKAGIIE
TNFREETETD LFGEQAVLCG GAVELIKAGF ETLVEAGYAP EMAYFECLHE LKLIVDLIYE
GGIANMNYSI SNNAEYGEYV TGPRIVTEDT KNAMRAVLKD IQTGEYAKSF LLENIAGAPT
LISRRRLNAE HQIEQVGGKL RAMMPWIAKN KLVDQTRN
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