| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1682 |
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| Symbol | |
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| ID | 4689844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1778437 |
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| End bp | 1781631 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834686 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_981916 |
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| Protein GI | 121604587 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.377778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG CTGAAGTCTC CATTCGCCGC CCGGTGTTCG CCACCGTGCT GTCGCTGCTG
ATCGTGCTGA TCGGCGCCGT CAGCTTTAAC CGGCTGACCG TGCGCGAATA CCCCAAGATC
GACGAGCCGG TCGTGACCGT GAGCGTTCGC TATGCCGGCG CGTCGGCCGA GGTGATCGAG
TCGCAGGTGA CCAAGCCGCT GGAGGATTCG ATTGCCGGCA TCGACGGCGT GGACGTGATC
ACCTCGATCA GCCGCGCCGA CCAGGGGCAG ATCAGCGTGC GCTTCCGGCT TGAAAAAGAC
GCCGACTCCG CCGCCGCCGA AGTGCGCGAC CGCACCTCGC GGGTGCGCAA CCGCCTGCCG
CAGGCCATCG AGGAGCCGGT GATCGCCAAG GTCGAGGCAG ACGCCTTTCC GGTCATCCAG
CTGGCTTTTT CGAGCGAGTC GCTGACGCCG CTGCAGATCA ACGACCTGGT CAATCGCATC
GTCAAGCCGC GCCTGCAAAC CGTCACCGGC GTGGCCGACG TGCGCATCTT CGGCGAGCGC
AAGTACGCCA TGCGCGTGTG GCTGGACACC GACAAGCTGG CGTCCTACCG ACTGACGACG
CAGGATGTCG AGGACGCGAT TCGGCGCAGC AACCTGGAGC TGCCGGCCGG GCGGATTGAA
TCGCAGCAAC GCGAATTCAG CGTGACCTCG CAGACCGACC TGCTCAAGCC GGCCCAGTTT
GGCGAGATCG TCATCAAGAC CGTCAACGGT TTTTCGGTCA GGGTCCGCGA TGTGGCCCGT
GTCGAGGAAG GCGCTGCCGA TGAGCGCACG GCAGTCCGGC TGAACGGCCG CCCGGCGGTC
GGCGTCGGCG TGATCCGCCA GGCGACGGCC AATCCGCTGG ACCTGTCCGC AGGCGTGCGG
GACGTGATCC CCAAGCTCAA GGCCGACCTG CCGCCCGATG TGTTGATCGA CATCGCCAAC
GACAACTCGG TGTTCATCGA CCGCTCGGTC AAGAACGTGT ACCGCACGAT TTTCGAAGCC
GTGCTGCTGG TGGCGCTGGT GATTTTTGTG TTCCTGCGCA CCTTGCGCGC GTCCATCATT
CCGATCATCA CGATTCCGGT CAGCCTGATT GGCACCTTTG CCTTGATGGC GCTGGCCGGC
TTCACCATCA ACACGCTGAC GCTGCTGGCG CTGGTGCTGG CCATCGGGCT GGTGGTCGAT
GATGCCATCG TGATGCTGGA AAACATCTTC CGGCATATCG AGGAGGGCAT GGACCCGTTC
TCGGCCGGCA TCAAGGGCGC GCGCGAGATC GGTTTTGCCA TCATCACCAT GACCGCCACG
CTGGTCGCGG TGTATGCGCC GCTGGCCTTC ACGCCGGGGC GCACCGGGCG GCTGTTCGTC
GAGTTTGCGC TGGCGCTGGC CGGCGCGGTG GTGGTGTCGG GCTTTGTCGC GCTGACGCTC
ACGCCCATGC TGTGCACCCA GCTGCTCAAG CACAACCCCA AGCCGAACCG CTTCGACCGC
ACCATGGAGC GCGTGCTCAC TAGCATTTCG GAGCGCTACG GCGCGCTGCT GCGCTGGATC
GTCACGGCGC GCTTTCAGCC GCCGGCCCAG GACCGCAGCA TCGGCCAGCG CATCAAGGGC
TTTGTGTTCC AGGCGCGCTG GATCGTGGTG GCCGTGATGC TGGTCAGCGG CGTAGCTATT
GTGCTGGTGT TCCCGACCAT GAAGCAGGAA CTCTCACCGA TGGAAGACCG GGGCGTGATC
CTGGCCAGCG TCAATGCGCC GGACGGCTCG ACGCTCGACT ACACCAACCG CTACGCCCAG
GCGCTGGAAA AGATGGGCCA GCCGTTCAAG GAATTCGACC GCATCTTTGC CAACGTCGGC
AACCCGACGG TGGCGCAGGC CAGCGTGGTC TATCGCACGG TGGACTGGGA GGTTCGCAGC
CGTTCGACCA TGGACATGGC GCGCGAACTG CAGCCCCAGT TCAATGCGCT GCCCGGCGTG
ACGGCTTTTT CAATCACGCC GCCTTCGCTG GGCCAGGGCT TTCGCGAGCG GCCGCTCAAT
TTCGTCATCC AGACCTCGGA CAGCTACCAG AACCTCAACG CCGTGGTGCG CCGCATGCTT
GACGAGATGG CCAAGAACCC GGGCATTGTC TCGCCCGACG TGGACTTGCG GCTGAACAAA
CCCGAACTGC GCATCGAGGT GGAACGCGAC CGGGCGGCCG ACCTCGGGGT GAGCGTCGAA
GTGGTCGCCA AGGCCATCGA GACGCTGCTC GGCGGGCGCA ACGTGACCCG CTACAAGCGC
GATGCCGAAC AGTACGACGT GGTGGTGCAG ACCCAGGCCA GCGGCCGCAG CACGCCCGAG
GACATCGAGC GCATTCATGT TCGCGGCCGC AATGAATCCA TGATTCCGCT CTCCAGCCTG
GTCAAGGTGA GCGAAAGTGT GTCGCCGCGC GAGCTGAACC ACTTCGGCCA GCGCCGCTCG
GTGTCTATCA CGGCCAGCCT GGCGCCCGAC TATTCTCTGG GTGAAGCCTT GGGCTTCATG
GACCAGACCG CCGCCAAGGT CTTGAAGACC GGCTACAGCA CCGACCTGAA CGGAACGTCG
CGCGAATTCA GGAATTCGCA GGGCGCGCTG GCCATCGTCT TCGTGCTGGC GCTGGTGTTC
ATTTTCCTGG TGCTGGCGGC GCAGTTCGAG AGCTTTGTCG ATCCGCTGGT GATCATGCTG
TCGGTGCCGC TGTCGATGAT CGGCGCGCTG CTGGCGCTGA AATGGAGCGG CGGCTCGCTC
AACGTCTATT CGCAGATCGG CCTGATCACG CTGGTCGGGC TGATCACCAA GCACGGCATC
TTGATTGTCG AGTTCACCAA CCAGCTGCGC GGGCAAGGCA TGGAGATGAT CGATGCGCTG
GTGAAGGCCT CGTCGCAGCG GCTGCGTCCG ATTTTGATGA CGACCGGCGC GATGGTGCTG
GGCGCCTTGC CGCTGGCCCT GGCCCATGGC GCGGGTGCCG AAAGCCGCAT CCAGATCGGC
TGGGTGATCG TTGGTGGCAT GTCGCTGGGC ACCTTGCTGA CGGTGTTCGT GGTGCCAACG
ATGTACGCCC TGTTTGCCCG CAGCGCCATA CCGGGGGCCA ACACGGCAGC GGTCAAGGAT
GAGCCATCAC ATCCGCTGCC TCATGCATCG TCACATCTAC CTGAGCCTGA GTATGTGGGG
AAGCCGGGCC GCTGA
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| Protein sequence | MQLAEVSIRR PVFATVLSLL IVLIGAVSFN RLTVREYPKI DEPVVTVSVR YAGASAEVIE
SQVTKPLEDS IAGIDGVDVI TSISRADQGQ ISVRFRLEKD ADSAAAEVRD RTSRVRNRLP
QAIEEPVIAK VEADAFPVIQ LAFSSESLTP LQINDLVNRI VKPRLQTVTG VADVRIFGER
KYAMRVWLDT DKLASYRLTT QDVEDAIRRS NLELPAGRIE SQQREFSVTS QTDLLKPAQF
GEIVIKTVNG FSVRVRDVAR VEEGAADERT AVRLNGRPAV GVGVIRQATA NPLDLSAGVR
DVIPKLKADL PPDVLIDIAN DNSVFIDRSV KNVYRTIFEA VLLVALVIFV FLRTLRASII
PIITIPVSLI GTFALMALAG FTINTLTLLA LVLAIGLVVD DAIVMLENIF RHIEEGMDPF
SAGIKGAREI GFAIITMTAT LVAVYAPLAF TPGRTGRLFV EFALALAGAV VVSGFVALTL
TPMLCTQLLK HNPKPNRFDR TMERVLTSIS ERYGALLRWI VTARFQPPAQ DRSIGQRIKG
FVFQARWIVV AVMLVSGVAI VLVFPTMKQE LSPMEDRGVI LASVNAPDGS TLDYTNRYAQ
ALEKMGQPFK EFDRIFANVG NPTVAQASVV YRTVDWEVRS RSTMDMAREL QPQFNALPGV
TAFSITPPSL GQGFRERPLN FVIQTSDSYQ NLNAVVRRML DEMAKNPGIV SPDVDLRLNK
PELRIEVERD RAADLGVSVE VVAKAIETLL GGRNVTRYKR DAEQYDVVVQ TQASGRSTPE
DIERIHVRGR NESMIPLSSL VKVSESVSPR ELNHFGQRRS VSITASLAPD YSLGEALGFM
DQTAAKVLKT GYSTDLNGTS REFRNSQGAL AIVFVLALVF IFLVLAAQFE SFVDPLVIML
SVPLSMIGAL LALKWSGGSL NVYSQIGLIT LVGLITKHGI LIVEFTNQLR GQGMEMIDAL
VKASSQRLRP ILMTTGAMVL GALPLALAHG AGAESRIQIG WVIVGGMSLG TLLTVFVVPT
MYALFARSAI PGANTAAVKD EPSHPLPHAS SHLPEPEYVG KPGR
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