Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1670 |
Symbol | |
ID | 4689712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1766257 |
End bp | 1768074 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639834674 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_981904 |
Protein GI | 121604575 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.595012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTATC TAGTGCTTGC CCGCAAATAC CGCCCCAAGA ATTTCTCTGA AATGGTGGGC CAGTCGCATG TCGTGCAGGC CCTGGGCAAT GCGCTCGGCA CCGGGCGGCT GCACCACGCC TACCTGTTCA CCGGCACCCG GGGCGTCGGC AAGACCACCG TTTCGCGCAT CCTGGCCAAG TCGCTCAACT GCACCGGCCC CGACGGGCAG GGCGGCATCA CCGCCACGCC CTGCGGCGTG TGCGACGCCT GCCGCGACAT CGACAGCGGC CGCTTCGTCG ATTACACCGA ACTCGACGCG GCATCCAACC GGGGCGTCGA TGAAATCGCC CAGTTGCTGG AGCAGGCGGT GTACAAGCCG GTCGTGGGCC GCTTCAAGGT CTTCATGATC GACGAGGTTC ACATGCTGAC GAACACGGCC TTCAACGCCA TGCTCAAGAC GCTGGAAGAA CCGCCTGAAT ACCTCAAGTT CGTGCTGGCC ACGACCGACC CGCAAAAAGT GCCGGCCACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTG CGTCCCATGG CGCCCGAAAC CGTGCTTGAA CACCTGGTGC AGGTGCTGGC CCTTGAAAAC GTCCCGGCCG AGCCGCAGGC CCTGCGCCTG CTGTCGCGCG CCGCGCGCGG CTCGATGCGC GATGCGCTGT CGCTGACCGA CCAGGCGATT GCCTTCGGCT CGGGCCGGCT CGACGAAGCC AGCGTGCGTG TCATGCTCGG CAGCGTGGAC CGCAGCTATG TGTTTCGCCT GCTCGATGCG CTGGCGCGCG GCGATGGCCG CACGGTGGTC GAAACCTCCG AAGTGCTGCG CCTCAACGGC CTGAGCGCTG CCTCGACGCT GGAGGAAATG GCGACCATCC TGCAGCGCAT GGCGGTGCTG CAGGCCGTCC CCGGCATGGG CGCGGGCGAC GACGACACCG ATCCGGAAAT TGCCGAGACC GCCCGGCTGG CCCAGGCCAT GCCGGCCGAT GAAACCCAGC TGCTCTACAG CCTGTGCCTG CACGGGCGCG GCGAGCTGGG CCTGGCGCCC GACGAATACG CGGCGCTGAC CATGGTGCTG CTGCGCCTGC TGGCCTTCAA ACCCCAGGCC TCCAGCGTAG CGTCTCCGGT TGCCGTCAAG CCTGCGCCGG GGAGTGCCGC CGAGCCGGCA AAAAAGCCGC TGCCTGAGCA AGCCGCAGCG CCTGCTGTCC ATCGAATTCC TGCAACGCAG AGCCGCCCGG CCGTGGTGCC GGCCGTGCAG GCTGTCCCAG CGCCGGTTTC TGCTCCAGTT TACGAATCAA ACAAGCCTTT TGCGCACGCT GGACAAGCGC GGGCTGCTAT TAATTCTGTA GCGCCTGAAA AACCGCCGGC CGATCAGCCT GTCATGCCCA CGGCGTCATC CCCCGGAACC TTGCTTCAGG ATGCTTCCCT TTGCGACGCC TGGGGCCAAC TGGTCAACCA ACTGGTGGCA GCCGAAGCCA TTGCGGCCCT GACGCGCGAG TTGGCCCTGC AGTCGGAGTT GCGCAGCCGC AGCGAAGGCG TCTGGACCTT GCGCGTCGAG CGCGAGTCAT TGAGCCAGCC TGCCGCGCGT GAAAAGCTGC AGCTTGCGCT TCAGGCGGCG CTGGTCGATC CGGCCCTTCA GCTCGCCGTG GAAGTCGGAC CCGTGACCGA CACCCCGGCA CGCCGCAACG GCGCCGCACT GGCCGAACGC CAGCGCGCCG CCGAAGCCTT GATTCAAAAT GACCCCTTCG TGCAGGACAT GATCCGCGAT TGGGGCGCCC GGATTGTTCC GGGCAGCATC AAGAGCGTTT CACCCTGA
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Protein sequence | MSYLVLARKY RPKNFSEMVG QSHVVQALGN ALGTGRLHHA YLFTGTRGVG KTTVSRILAK SLNCTGPDGQ GGITATPCGV CDACRDIDSG RFVDYTELDA ASNRGVDEIA QLLEQAVYKP VVGRFKVFMI DEVHMLTNTA FNAMLKTLEE PPEYLKFVLA TTDPQKVPAT VLSRCLQFNL RPMAPETVLE HLVQVLALEN VPAEPQALRL LSRAARGSMR DALSLTDQAI AFGSGRLDEA SVRVMLGSVD RSYVFRLLDA LARGDGRTVV ETSEVLRLNG LSAASTLEEM ATILQRMAVL QAVPGMGAGD DDTDPEIAET ARLAQAMPAD ETQLLYSLCL HGRGELGLAP DEYAALTMVL LRLLAFKPQA SSVASPVAVK PAPGSAAEPA KKPLPEQAAA PAVHRIPATQ SRPAVVPAVQ AVPAPVSAPV YESNKPFAHA GQARAAINSV APEKPPADQP VMPTASSPGT LLQDASLCDA WGQLVNQLVA AEAIAALTRE LALQSELRSR SEGVWTLRVE RESLSQPAAR EKLQLALQAA LVDPALQLAV EVGPVTDTPA RRNGAALAER QRAAEALIQN DPFVQDMIRD WGARIVPGSI KSVSP
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