Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1634 |
Symbol | |
ID | 4687865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1721523 |
End bp | 1723460 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639834638 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_981869 |
Protein GI | 121604540 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.679951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT TCATTCGCAA GCACACCAAG TGGACCATGG CATTGCTGTT TTTGCTGATT GTTCCTTCCT TCATATTGGT CGGTATGAAC AGCAATCCTT CCAGCGAAAA GGGGGGCGTG GTCGCCAAGG TGGATGGAAC GGAAATTACC CAGCCCGAGT GGGACCGCGA GCATCTGAAA GAAGTGGACC GCCTGCGCGC CTCCATGCCG ACACTGGATG CCAAATTGCT GGATTCGCCC GAGGCACGCT ATGCCACGCT GGAGCGCATG GTACGCGACC GGGTTGTTGC CGTAGCCGCT GAAAAACTCA AGCTCTCCAC CAGCGACCAG CATTTGGCCC GAGAGTTGCA GAACAGTCCC GAAATTGCCG CCTTGCGGCG GGCCGATGGC TCGCTTGACA TGGACCGCTA CCGCCAGTTG CTGGGCACTC AGGGAATGAG TCCTGAAATG TTCGAAGCCA ATGTGCGTAC TGATTTGTCC AGGCGACAGG TTCTGGCGGG TGTTTCGGGC AGCGGATTTG CATCCAACTC GGCCGCTGAC ATGGCACTGA ATGCCTATTT TGAAAAACGC GAGATTCAAC TCGCCCGTTT CAATGCCGCC GATTACGCAG CAAAGCTGAC ACCGACGGAC GCTGACCTTG AGCAGTATTA CAAGGCCAAT GAAAAACTTT TCCAAGCCCC CGAACAAGCC AGTATCGAGT ACGTACTGCT TGATCTGGAG GCGCTGAAAA AGGGCATTGC TGTCAATGAA GCTGATCTTA AAACCTATTA TGAGCAGAAT GCTCGGCAAC TGAGCGGGAC TGAAGAGCGT CGCGCCAGCC ACATACTGAT TACTGCGTCC AAGACTGCAT CGCCAGAAGA GCGCGAGAAA GCCAAGACCA AGGCAGAAGA GTTGCTGGCC ACCGTTAAAA AGTCTCCTGA AAATTTTGCG GACGTAGCCA GGAAAAATTC CCAAGATCCA GGCTCCGCGA CCAATGGTGG TGACCTTGAT TTTTTTGCCC GTGGCGCCAT GGTCAAGTCG TTTGAAGATG CTGCCTTTTC CATGAACAAA GGCGATATCA GCGAGGTGGT TGCGTCTGAT TTTGGTTATC ACATCATCAA GCTGACCGAT ATCAAGGCGC CCAAGCAGCG TACTTTTGAG GAAATGAGAC CACAACTTGA GGCTGAACTG CAAAAGCAGC AGGCCCAGAA GAAGTTTTCT GAAGCAGCAG AGGCGTTTTC GAATGGTGTG TATGAGCAGT CTGATAGCCT TAAGCCGGTA GCTGAACGTT TAAAACTTGA GGTTAAAACG GCTGGCAATG TAGGGCGTCA ACCGGCATCT GGCGTGACTG GCGCCTTGGC CAATCCAAAA TTTCTCACTG CTCTTTTTTC ACCCGATTCC ATTGAAAAAA AGCGCAATAC CGAAGCCATT GAAGTGGGCC CAAGCCAACT GGTATCGGGG CGCATCGTGC AATACACCCC GGCTCGTACT CAGCCTTTGG CTGATGTAAA AGACAATGTT CGCCAGCGCT GGCTGGCGCA ACGTAGTGCC GAAGAAGCAC GCAAAGATGG AGTTGCCAAG CTAACTGAAT GGAAGGCCGC ACCGAGCACG GCTACGGCCC TAACTTCTCC CATTCTGGTG TCGCGTGAGC AAGCACAACA ATTGCCAGTT CAAGTCGTTG ATGCAGCGCT TCGCGCAGAT ACAGGCGCTT TGCCGATTTT TTCTGGTATT GATCTGGGAG CGCAGGGTTA TGCCATCGTC AAAGTCAACA AGGTCGTGCC ACGTGATGCT CCTTTAGAGG CTGCCGCCAA ACAGGAGCGT AGCCAATATG GCCAATGGTG GACATCCGCG GAGGCACTCG CTTACTACAA TGGCCTCAAA GACCGTTTCA AGGCGGAAAT CTTGGTTGTC AAACCCACAG TGGCCAAGCT AAATTCAGAA GCAGGCGTAA CTCAGTAA
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Protein sequence | MFDFIRKHTK WTMALLFLLI VPSFILVGMN SNPSSEKGGV VAKVDGTEIT QPEWDREHLK EVDRLRASMP TLDAKLLDSP EARYATLERM VRDRVVAVAA EKLKLSTSDQ HLARELQNSP EIAALRRADG SLDMDRYRQL LGTQGMSPEM FEANVRTDLS RRQVLAGVSG SGFASNSAAD MALNAYFEKR EIQLARFNAA DYAAKLTPTD ADLEQYYKAN EKLFQAPEQA SIEYVLLDLE ALKKGIAVNE ADLKTYYEQN ARQLSGTEER RASHILITAS KTASPEEREK AKTKAEELLA TVKKSPENFA DVARKNSQDP GSATNGGDLD FFARGAMVKS FEDAAFSMNK GDISEVVASD FGYHIIKLTD IKAPKQRTFE EMRPQLEAEL QKQQAQKKFS EAAEAFSNGV YEQSDSLKPV AERLKLEVKT AGNVGRQPAS GVTGALANPK FLTALFSPDS IEKKRNTEAI EVGPSQLVSG RIVQYTPART QPLADVKDNV RQRWLAQRSA EEARKDGVAK LTEWKAAPST ATALTSPILV SREQAQQLPV QVVDAALRAD TGALPIFSGI DLGAQGYAIV KVNKVVPRDA PLEAAAKQER SQYGQWWTSA EALAYYNGLK DRFKAEILVV KPTVAKLNSE AGVTQ
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