Gene Pnap_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1614 
Symbol 
ID4687405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1701325 
End bp1701792 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID639834617 
Productthioesterase superfamily protein 
Protein accessionYP_981849 
Protein GI121604520 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000153197 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTGGC AAAATGGCGC TTCAATGACC CTGACTCCAC GCCCCCAGGC CGAATACCGC 
CATGCCTACA AAGCTTTTCG CGCCATCGGC ACCCGCTGGT CCGACAACGA CCTGTACGGC
CATGTCAACA ACGTCGTTTA TTACAGCTGG TTTGACACCG CCGTCAACGG CCTGCTGATC
GAGCGCGGCG CGCTCGACAT CCATGCCGGC AGCGTGATTG GCCTGGTGGT TGAAACCCAA
TGCAACTATT TTTTGCCGCT GGCCTTTCCC GAACCCGTGG TCGCCGGCAT TCGCGTGGCG
CACATCGGCG CGTCCAGCGT GCGTTACGAG GTCGCGCTGT TTGCCGCTGA CGAAAGCCTG
TCGTGCGCCG CCAAAGGCCA TTTCATCCAT GTGTATGTGG ACCGCGCCAC GCGCCGGCCC
GCCGTCTTGC CCCCTGAATT ATTGTCTGTA CTGGAGCTGC TGAAGTGA
 
Protein sequence
MHWQNGASMT LTPRPQAEYR HAYKAFRAIG TRWSDNDLYG HVNNVVYYSW FDTAVNGLLI 
ERGALDIHAG SVIGLVVETQ CNYFLPLAFP EPVVAGIRVA HIGASSVRYE VALFAADESL
SCAAKGHFIH VYVDRATRRP AVLPPELLSV LELLK