| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1609 |
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| Symbol | |
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| ID | 4687158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1696402 |
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| End bp | 1697169 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834612 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_981844 |
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| Protein GI | 121604515 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0605669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCG CAGGCAAAGT ATTCATCGTC ACCGGTGGCG CATCAGGTCT GGGTGAAGGC
ACTGCGCGCA TGCTGGTCGC CAACGGCGGC AAGGTCGTGA TTGCCGACAT GCAGGCTGAA
AAAGGCGAAG CCATCGCCAA GGAACTGGGC GACGGCGTTG CCGCTTTCGT CAAGTGCGAC
GTGAGCCAGG AAGCCGACGG CCAGGCCGTG GTGGCCAAGG CCGTGTCCAT GGGCAAGCTG
ATGGGCCTGG TCAACTGCGC CGGCATCGCG CCCGGCGAGA AAACCATCGG CAAAAACGGC
GCGCACACGC TGGCGACCTT CACCAAGACC ATCACCGTCA ACCTGGTGGG CAGCTTCAAC
ATGATCCGCC TGGCCGCCGA AGCCATGGCC AAAAACGAAC CCGAAGCCAC CGGCGAGCGC
GGCGTCTTGA TTTCCACCGC CTCCGTCGCC GCCTACGACG GCCAGATGGG CCAAGCCGCC
TACAGCGCTT CCAAGGGCGG CGTGGTCGGC ATGACGCTGC CCATTGCCCG CGACCTCGCG
CGCAACGGCA TCCGCAACAT GACGATTGCC CCCGGCATTT TCGGCACGCC GATGATGTTC
GGCATGCCGC AGGACGTGCA GGACTCGCTG GCCGCCGCCG TGCCCTTCCC TTCGCGCCTG
GGCACCCCGC TGGACTACTC CAAGCTGGCC AAGCACATTT TTGAAAACGA CATGCTCAAC
GGCGAAGTGA TCCGCCTGGA CGGCGCGATT CGACTGGCAC CGCGCTAA
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| Protein sequence | MDIAGKVFIV TGGASGLGEG TARMLVANGG KVVIADMQAE KGEAIAKELG DGVAAFVKCD
VSQEADGQAV VAKAVSMGKL MGLVNCAGIA PGEKTIGKNG AHTLATFTKT ITVNLVGSFN
MIRLAAEAMA KNEPEATGER GVLISTASVA AYDGQMGQAA YSASKGGVVG MTLPIARDLA
RNGIRNMTIA PGIFGTPMMF GMPQDVQDSL AAAVPFPSRL GTPLDYSKLA KHIFENDMLN
GEVIRLDGAI RLAPR
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