| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1592 |
|---|
| Symbol | |
|---|
| ID | 4686474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1675818 |
|---|
| End bp | 1676720 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639834595 |
|---|
| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
|---|
| Protein accession | YP_981827 |
|---|
| Protein GI | 121604498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG ACTTCATCAA GGCAGAGCTG GTGCTCGACG CGCGCAACGC AACGGGCGAA
AGCCCGGTCT GGAACGGCGC GGAGCAGGCG CTGTACTGGG TCGATATTCC GGCGCGCACG
CTGTGCCGCT GGACGCCGGC AACCGGCGAA GCTAGCTGCT GGCTGGCGCC TGAAATGCTG
GCTTGCGTGG CGATGACGCC GGCGGCAAAT ACCTGGATAG CCGGCGCCGA AAGCGGAATC
TTTCAGCTGC AACTCCAGGA CGACGGACAG CTCGGCTTTG AAAGCCTCGC ACCCGTCAGC
CACGCCATGC CCGGCATGCG CTTCAACGAT GGCCGCTGCG ACCGCCAGGG GCGCTTCCTG
GCCGGAACAA TGTTGATGAA TATGGCCGCT GGCGCAAGCG TGGGTTGCGT CTACAGCTAT
CAAAAAGAGA GTGGACTGAC GAAACTGCTG GACGGCTTCA TCACGCCCAA CGGCATGGCC
TTCAGCCTTG ACGGCCGCAC CATGTACCTG TCGGACTCGC ATCCTTCGGT GCAGTCGGTC
TGGGCCTTTG ACTACGACCT GGACACTGGC ACGCCGTCGA ACCGCCGGCT GTTCATCGAC
ATGAAGCCGC TGCCCGGCCG GCCTGACGGC GCGGCGGTGG ATGCCGACGG CTGCTACTGG
ATCTGCGGCA ACGATGCCGG GCTGGTCCAC CGCTTCACGC CTGACGGCAA GCTGGACCGT
TCGCTGGCCG TGCCGGTGAA AAAACCGGCC ATGTGCGCCT TTGGCGGCGC CGGCCTGGAC
ACCCTGTTCG TCACGTCGAT TCGCCCCGAA GGCGTCGATC TGTCTGACCA GCCGCTGGCC
GGCGGTGTGT TTGCGCTGCG CCCCGGCGTG CGCGGACTGC CTGAGCCCGC ATTCCTGAAT
TGA
|
|---|
| Protein sequence | MSSDFIKAEL VLDARNATGE SPVWNGAEQA LYWVDIPART LCRWTPATGE ASCWLAPEML
ACVAMTPAAN TWIAGAESGI FQLQLQDDGQ LGFESLAPVS HAMPGMRFND GRCDRQGRFL
AGTMLMNMAA GASVGCVYSY QKESGLTKLL DGFITPNGMA FSLDGRTMYL SDSHPSVQSV
WAFDYDLDTG TPSNRRLFID MKPLPGRPDG AAVDADGCYW ICGNDAGLVH RFTPDGKLDR
SLAVPVKKPA MCAFGGAGLD TLFVTSIRPE GVDLSDQPLA GGVFALRPGV RGLPEPAFLN
|
|---|
| |